KEGG   Rhodococcus opacus B4: ROP_56430Help
Entry
ROP_56430         CDS       T00882                                 

Gene name
sucD
Definition
(GenBank) succinyl-CoA synthetase alpha chain
  KO
K01902  succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Organism
rop  Rhodococcus opacus B4
Pathway
rop00020  Citrate cycle (TCA cycle)
rop00640  Propanoate metabolism
rop00660  C5-Branched dibasic acid metabolism
rop01100  Metabolic pathways
rop01110  Biosynthesis of secondary metabolites
rop01120  Microbial metabolism in diverse environments
rop01130  Biosynthesis of antibiotics
rop01200  Carbon metabolism
Module
rop_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rop_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:rop00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    ROP_56430 (sucD)
   00640 Propanoate metabolism
    ROP_56430 (sucD)
   00660 C5-Branched dibasic acid metabolism
    ROP_56430 (sucD)
Enzymes [BR:rop01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     ROP_56430 (sucD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: CoA_binding Ligase_CoA Succ_CoA_lig CoA_binding_2 Glyco_tran_WecB
Motif
Other DBs
NCBI-ProteinID: BAH53890
NITE: ROP_56430
UniProt: C1AWW7
Position
6168724..6169626
Genome map
AA seq 300 aa AA seqDB search
MAIFLTKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVTHDGGVELPVFG
TVAEAIEKTGADVSIAFVPPAFAKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWAYNVSK
GNKTRIIGPNCPGIITPGESLVGITPANIAGSGPIGLVSKSGTLTYQMMFELRDFGFSTA
IGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANVTKPVVGYVA
GFTAPEGKTMGHAGAIVSGSSGTAQAKKDALEAAGVKVGKTPSETAALAREILQSLTVQA
NT seq 903 nt NT seq  +upstreamnt  +downstreamnt
atggctatcttcctgaccaaggactccaaggtcatcgtccagggcatcaccggcggcgag
ggcacgaagcacaccgcgctgatgctcaaggccggcacccaggtcgtcggcggtgtcaac
gcccgtaaggccggcaccaccgtgacccacgacggcggcgtcgagctgcccgtcttcggc
accgtcgccgaggccatcgagaagaccggcgcggacgtctccatcgcgttcgttcccccg
gccttcgcgaaggacgccatcgtcgaggccatcgacgcggagatcccgctgctcgtggtc
atcaccgagggcatccccgtgcaggactcggcgtacgcctgggcgtacaacgtgtccaag
ggcaacaagacccgcatcatcggacccaactgccccggcatcatcaccccgggcgagtcg
ctggtcggcatcacccccgccaacatcgcaggcagcggcccgatcggcctcgtgtccaag
tcgggcacgctgacctaccagatgatgttcgagctgcgtgacttcggcttctccaccgcc
atcggcatcggcggcgacccggtcatcggcaccacccacatcgacgccatcgaggcgttc
gagaaggaccccgagaccaaggtcatcgtgatgatcggtgagatcggtggcgacgccgag
gagcgtgccgccgattacatcaaggcgaacgtcacgaagccggtcgtcggctacgtcgcg
ggcttcaccgcccccgagggcaagaccatgggccacgcaggcgccatcgtgtccggttcc
tcgggcaccgcgcaggccaagaaggacgccctcgaggctgccggcgtgaaggtcggcaag
acgccgtccgagaccgctgcgctcgctcgcgagatcctgcagagcctgaccgtccaggcg
tag

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