KEGG   Rhodococcus opacus B4: ROP_68730
Entry
ROP_68730         CDS       T00882                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
rop  Rhodococcus opacus B4
Pathway
rop03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    ROP_68730 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rop03400]
    ROP_68730 (ruvB)
Enzymes [BR:rop01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ROP_68730 (ruvB)
DNA repair and recombination proteins [BR:rop03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     ROP_68730 (ruvB)
    RecFOR pathway proteins
     ROP_68730 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_16 Mg_chelatase nSTAND3 RNA_helicase AAA_3 AAA_14 IstB_IS21 Resolvase Zeta_toxin Sigma54_activ_2 Rad17 DUF815 AAA_18 NTPase_1 TsaE
Other DBs
NCBI-ProteinID: BAH55120
NITE: ROP_68730
UniProt: C1B4D1
Position
7495768..7496865
AA seq 365 aa
MSPELGGGYDGESPVSADLVAGDGDIEASLRPKNLHDFIGQPRVREQLQLVLTGAKMRGG
TPDHILLSGPPGLGKTSMAMIIAAELGSSLRLTSGPALERAGDLAAMLSNLVEGDVLFID
EIHRIARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEVAPFTLVGATTRSGALTGPLRD
RFGFTAHMDFYEPAELKQILMRSAGILGVQLGEEAGAEIASRSRGTPRIANRLLRRVRDY
AEVRADGVVTREIAHAALAVYDVDQLGLDRLDRSVLSALVRSFGGGPVGVSTLAVAVGEE
PATVEEVCEPFLVRAGMIARTPRGRVATAAAWTQLGLTPPPDAVTGGIDVRVNEPQASLF
DPEDP
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgagtcccgaactcggcggcggctacgacggcgagtccccggtctcggccgacctcgtc
gccggcgacggtgacatcgaggccagcctgcggccgaagaacctgcacgatttcatcggg
cagccgcgggtccgggagcagttgcaactcgtcctgaccggcgccaagatgcgcggcggc
acccccgaccacatcctgctctccggcccgcccgggctggggaagaccagcatggcgatg
atcatcgccgccgaactggggtcctcactgcggctgacatcgggtccggcgctcgagcgc
gccggcgacctggccgccatgttgagcaatctcgtcgagggcgacgtgctgttcatcgac
gagatccaccgcatcgcccgccccgcggaagagatgctctacctcgcgatggaggacttc
cgggtcgacgtcgtggtcggcaagggccccggcgccacctccatccccctggaggtcgcg
ccgttcaccctggtcggggccaccacccgctcgggggcgctcaccggcccgctgcgcgac
cggttcgggttcaccgcccacatggacttctacgaaccggcggagctgaagcagatcctc
atgcgatcggcgggcatcctcggggtgcagctcggcgaggaggccggcgccgagatcgcg
agccggtcccgcggcacgccccgcatcgcgaaccgcctgctccgccgcgtccgcgactac
gccgaggtccgcgcggacggcgtcgtcacccgcgagatcgcgcacgcggccctcgccgtg
tacgacgtcgaccagctgggactcgaccgcctcgaccgctccgtcctcagcgccctggtg
cgcagcttcggcggcggaccggtcggcgtgtccaccctggccgtcgcggtcggtgaggaa
cccgccaccgtcgaagaggtgtgtgagccgttcctcgtccgcgccggaatgatcgcccgc
acaccccgcggccgggtcgccaccgcggccgcgtggacgcaactcggcctgacaccgccg
ccggacgccgtgaccggcggaatcgatgtccgcgtcaacgagccgcaggcgtccctgttc
gatcccgaagacccctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (21)   
   Pfam (21)   
All databases (33)   

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