KEGG   Roseomonas sp. FDAARGOS_362: CTJ15_04845
Entry
CTJ15_04845       CDS       T05160                                 
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ros  Roseomonas sp. FDAARGOS_362
Pathway
ros03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ros00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CTJ15_04845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ros03400]
    CTJ15_04845
Enzymes [BR:ros01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     CTJ15_04845
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CTJ15_04845
DNA repair and recombination proteins [BR:ros03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CTJ15_04845
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS HupF_HypC
Other DBs
NCBI-ProteinID: ATR19690
UniProt: A0A2D2H0Y9
Position
complement(22982..23872)
AA seq 296 aa
MPELPEVETVMRGLSAVLTGRTIAHAETRRAGLRWPFPPDLAMRLTGARVEGFRRRAKYM
LMRLSTGDSMLVHLGMSGRMVARLEESPPVPSLGPQGAASDTRGAAPERHEHLVMETEDG
WRVGFCDPRRFGMVDLVPTAAEDSHRLLAGLGPEPLDDAFTPAILSRALAGKATPIKAAL
LDQRIVAGLGNIYVSEALYRAGISPRRLAGTVPGARAARLVPAIKAVLEESIEAGGSSLR
DYVRADGEVGFFQERFHVYDREGGACPACPGPPKCPGIARIVQAGRSTFFCPRTQR
NT seq 891 nt   +upstreamnt  +downstreamnt
atgcccgaactgcccgaggtcgagaccgtgatgcggggcctgtccgccgtgctcaccggc
cgcaccatcgcccatgccgagacccgccgcgccgggctgcgctggcccttcccgcccgac
ctggcgatgcgcctgaccggggcgcgggtggagggattccgccgccgcgcgaaatacatg
ctgatgcgcctgtccaccggcgattcgatgctggtccatctcggcatgtccggccgcatg
gtggcgcggctggaggagtcgccgccggtcccttccctggggccgcagggcgcggcctcc
gacacgcgcggcgcggcgccggagcggcatgagcacctggtgatggagacggaggatggc
tggcgggtcggcttctgcgacccgcggcgcttcgggatggtggacctcgttcccaccgcg
gcggaggattcgcaccgccttctggccgggctggggccggagccgctggacgacgccttc
acccccgccatcctgtcccgtgccctggccggcaaggcgacgccgatcaaggccgcgctg
ctggaccagcgcatcgtggccgggctcggcaacatctacgtgtcggaggcgctctaccgc
gccgggatctccccccgccgcctggccggcacggtgcccggtgcccgtgccgcgcggctg
gtgccggcgatcaaggcggtgctggaggaatccatcgaggccggcggctcctcgctgcgc
gactatgtgcgggcggatggggaggtcggcttcttccaggagcgcttccatgtctatgac
cgggagggtggcgcctgccccgcctgccccggcccgccgaagtgtcccggcatcgcccgc
atcgtgcaggccgggcgcagcactttcttctgcccccggacccagcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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