KEGG   Roseivivax sp. THAF197b: FIV09_01610
Entry
FIV09_01610       CDS       T06253                                 
Symbol
hup
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
rot  Roseivivax sp. THAF197b
Brite
KEGG Orthology (KO) [BR:rot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rot03032]
    FIV09_01610 (hup)
   03036 Chromosome and associated proteins [BR:rot03036]
    FIV09_01610 (hup)
   03400 DNA repair and recombination proteins [BR:rot03400]
    FIV09_01610 (hup)
DNA replication proteins [BR:rot03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    FIV09_01610 (hup)
Chromosome and associated proteins [BR:rot03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    FIV09_01610 (hup)
DNA repair and recombination proteins [BR:rot03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      FIV09_01610 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_euk_2 HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: QFS81513
UniProt: A0A5P8YW27
Position
complement(312938..313225)
AA seq 95 aa
MAKPMTKTQLVAALAEEMDSDKKSAGEALDAITSIITREVAGGGAVTLPGVGKIYCRERP
ERMVRNPATGEQFKKEADKQVKMTIAKALKDSVNG
NT seq 288 nt   +upstreamnt  +downstreamnt
atggcgaagcccatgaccaagacccagctcgttgccgcactcgcggaagagatggacagc
gacaagaaatccgcaggcgaggcactggacgccatcaccagcatcatcacgcgcgaagtc
gcaggcggcggtgccgtgaccctgcccggcgtcggcaagatctactgccgcgagcgcccc
gagcgcatggtccgcaaccccgcgaccggcgagcagttcaagaaagaggccgacaagcag
gtcaagatgaccatcgccaaggccctcaaggacagcgtcaacggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system