KEGG   Roseivivax sp. THAF197b: FIV09_01620
Entry
FIV09_01620       CDS       T06253                                 
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
rot  Roseivivax sp. THAF197b
Brite
KEGG Orthology (KO) [BR:rot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rot03032]
    FIV09_01620
   03400 DNA repair and recombination proteins [BR:rot03400]
    FIV09_01620
Enzymes [BR:rot01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     FIV09_01620
DNA replication proteins [BR:rot03032]
 Prokaryotic type
  DNA Topoisomerases
   FIV09_01620
DNA repair and recombination proteins [BR:rot03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      FIV09_01620
SSDB
Motif
Pfam: Top1B_N_bact Topoisom_I DUF6285 DNA_Packaging_2
Other DBs
NCBI-ProteinID: QFS81515
UniProt: A0A5P8YW09
Position
314921..315931
AA seq 336 aa
MREPAFKGMQDIADLTYYPDNRPGITRRKQGRGWRYIAPDGTGIDAPEERRRLNALAVPP
AYRDVWMCPDPRGHLQATGRDDRKRKQYRYHADWTAFRARKKFAHLAAFGAALPSLRQRI
LRDLRDHEAGDHDFAVAAILALLDRANLRVGNPDYARQNKTFGATTLRSRHLDLTEDEVR
LDYRAKGGEKVKKRLRDRTLNRVLERLDDLDGPTLVAWEDTDGTARSVGSDTINARLADW
TGEAAITAKTFRTWNGSAAALDVAMRSETVTIKAMTEAAAERLHNTPAICRTSYVHPRVI
DLAEVPFDVRRAYLSDAPDIRGLRQSEAALLNLLRD
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgcgcgagccagcgttcaaagggatgcaggatatcgccgatcttacctattaccccgat
aacaggcccgggatcacgcgccgaaagcaggggcgcggctggcgctacatcgcgccggac
ggcactgggatcgacgcgcccgaggaacgccgccgtctgaacgcgctcgccgtgccgccg
gcctatcgcgacgtgtggatgtgccccgatccgcgcgggcacctccaggccaccgggcgc
gatgatcgcaagcgcaagcaataccgctatcacgccgactggaccgcgttccgggcgcgc
aagaaattcgcgcatctggcagccttcggtgcggcgttgccgtccttgcgtcaacgcatc
ctgcgtgacctgcgcgaccatgaggcgggcgatcacgacttcgcggtggcggccatcctc
gcccttctggaccgcgccaatctgcgggtgggaaacccggattacgcgcgccagaacaag
acgttcggcgccaccaccctgcgttcgcgccatctcgacctgaccgaggacgaggtacgc
ctcgattaccgcgcgaaagggggcgagaaggtgaaaaagcgcctgcgcgaccgcacgctc
aatcgcgttctggagcggctcgacgatctggacgggccgacgctcgtggcatgggaggat
acggacggcaccgcgcgctccgtgggctccgacacgatcaatgcccggctcgcggactgg
accggcgaggcggcgatcacggccaagaccttccggacctggaatggcagcgctgcggcg
ctcgatgtggccatgcggagcgagacggtcacgatcaaggccatgacggaagccgcggca
gagcggctccacaacacgcccgcgatctgccggacaagttatgtgcatccgcgcgtgatc
gatctggctgaggtaccatttgacgtgcggcgcgcctatttgagcgatgcgcctgacatc
cgggggctgcgccagtcggaagccgcccttctgaacctgctgcgcgactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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