KEGG   Rahnella sikkimica: BV494_05315
Entry
BV494_05315       CDS       T05331                                 
Name
(GenBank) ABC transporter
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
rox  Rahnella sikkimica
Pathway
rox02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rox00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BV494_05315
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rox02000]
    BV494_05315
Transporters [BR:rox02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    BV494_05315
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N RsgA_GTPase AAA_22 AAA_29 AAA_16 oligo_HPY AAA_25 NACHT nSTAND1 nSTAND3 AAA_5 MMR_HSR1 TsaE AAA_24 ATP-synt_ab AAA_33 ATPase Mg_chelatase DUF87 DLIC
Other DBs
NCBI-ProteinID: AVF34382
UniProt: A0A2L1UN84
Position
complement(1156314..1157939)
AA seq 541 aa
MSDAILQVHDLCVGYRETVLVDKVSFTLRQGEVLGLIGESGAGKSTLGLAVMGHYRGALR
PLSGTVTFLGKTYPPQDAPRLALHQGKRICYVAQSASAGFNPALTLGAQVTEAACYHRVI
SKKAAQERMLQLFGLLGLPDPVQFARRYPHQVSGGQLQRAMTAMALCSSPDVIVFDEPTT
ALDVTTQLDVLAAIRHAVKQTHTAALYISHDIAVVSQIADSLLVLRHGKPVESGPTAEIL
RAPAQAYTQALLGTRHPASLETPGQTLPVLELRNLTVGYGNGEPVISRLSLSLPRGQTFA
LVGESGSGKSTLARTLAGLQKPASGELSLEGVTLSFDCQRRTSAQRQRIQYIYQNPDTAL
NPRHRVRELVGRNVARFSGLRGAAFSEQISQLLEQVELSRDLIDRFPSQLSGGQKQRVAI
ARALAAEPDILICDEPTSALDPLVAQGVLTLFRKLQHATGLTLLFITHDIATVRSIAHSV
AVMHRGKLVRQGLRETVLAPPYDDYTARLLQAEPTLEPGWLDNVLTQQSPAQTFLLQEMP
T
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgtcagacgccattttgcaggtacatgatctctgcgtgggctaccgggaaacggtactg
gtggataaggtttctttcacattgcgccagggtgaagtgctcgggctgatcggagaatcg
ggtgccgggaaatccacgctcgggctggcggtgatggggcattatcgtggcgcgttgcgt
ccgctcagcggcacggttacgtttctcggtaagacttaccccccgcaagatgccccgcgt
ttagccttgcatcagggcaaacggatttgctatgtggcgcagtcggccagcgccgggttt
aatccggcgttaaccctcggcgcacaggtgaccgaagccgcctgttatcaccgcgtcatc
agcaaaaaggcggcgcaggaacggatgttgcagctgtttggcttgctcggtttgcccgac
cctgtgcagttcgcccggcgatatccgcaccaggtttccggcgggcagttgcagcgcgca
atgaccgccatggcgctgtgttcatcgccggacgtgattgtcttcgatgaaccgaccacc
gctctggatgtcacgacccagctcgacgtgctggccgccatccgccacgccgtaaagcaa
acgcacaccgccgcgttgtatatctcgcatgatattgccgtggtttcccagattgccgac
agcctgctggtgctgcgacacggcaagccggtggaaagtggccccacggcggagatttta
cgcgcgcctgcgcaggcttatacgcaggcgctgctcggcacccgtcatcccgcgtcgctg
gaaacgccgggacaaactctgccggtgctggaactgcgcaatctcaccgtaggttacggc
aacggcgaaccggtgatttcccggctttcgctctcactgccacgcggacaaacttttgcg
ttagtcggcgaatccggctcggggaaatccaccctcgcccgcacgctggccggtttgcaa
aaacctgcatccggcgagctgtcgcttgaaggcgtaacgctgtcatttgactgtcagcgc
cgtacatccgcgcagcgtcagcggatccagtacatctatcagaacccggataccgcgctg
aatccgcgccatcgcgttcgcgaactggtaggccgcaatgttgcgcgcttcagcggttta
cgcggcgcggcgttcagcgagcaaatcagccagttactcgaacaggtcgagctttcccgc
gatctgattgatcgttttccatctcagctttccggcggccagaaacagcgggtggcgatt
gccagggcgctggcggctgaaccggacattctcatttgtgacgaacccacttcggcgctg
gatcctctggtcgcgcaaggcgtgctgacgctgttccgtaagctacagcacgccaccggc
ctgacgctgcttttcattacccatgacatcgcgaccgtgcgcagcatcgcgcattccgtc
gcggtgatgcaccgtggaaaactggtgcgtcaggggctgcgggaaaccgtgctggctccg
ccttacgatgattacaccgcgcgcctgctacaggctgaaccgacgctcgaacccggctgg
ctggataacgtgttaacgcagcagtcacccgctcagacttttttattacaggaaatgccg
acatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (31)   

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