KEGG   Rahnella sikkimica: BV494_10880
Entry
BV494_10880       CDS       T05331                                 
Name
(GenBank) endonuclease VIII
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
rox  Rahnella sikkimica
Pathway
rox03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rox00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BV494_10880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rox03400]
    BV494_10880
Enzymes [BR:rox01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BV494_10880
DNA repair and recombination proteins [BR:rox03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BV494_10880
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS TniQ
Other DBs
NCBI-ProteinID: AVF35406
UniProt: A0A2L1UR37
Position
complement(2364316..2365110)
AA seq 264 aa
MPEGPEIRRAADLLAAAVVNKPLTDVWFAFPNLKPYQSALRGTKITAIETRGKALLTHFS
NGLTLYSHNQLYGVWRVIQAGETPKETKRSLRVKLETTDAAILLYSASEIGLYDTAEIEN
HPFLQRIGPDVLDETLTVAQVRERLLSPKFRNRQLGGMLLDQAFLAGLGNYLRAEILWLA
KLLPDHKANELNDAELDALADACLSVARLSYATRGTMDENVHHGALFRFKVFGRTGKPCA
RCGDPIEKGSVSSRPFFWCPVCQV
NT seq 795 nt   +upstreamnt  +downstreamnt
atgcctgaaggtcctgaaattcgccgcgctgccgatctgctggcagccgcggtcgttaac
aaaccgctcacggatgtctggttcgcttttcccaatctgaagccttaccagtcggcatta
cgtggcacaaaaattacggcgattgaaacccgtgggaaagcgctactgacgcacttttcc
aacggcctgacgctctacagccacaaccagctttatggcgtctggcgggtgattcaggcc
ggtgaaacgccgaaggagaccaaacgttcgctgcgggtaaaactcgaaaccacggacgcg
gcgatcttgctctacagcgcgtctgagatcgggctttacgatacggcggagatagaaaat
cacccgttcctgcaacgtatcgggccggacgtgctggatgaaaccctgaccgtcgcgcag
gtacgtgagcggttactttcgccgaaattccgcaaccgtcagctcggcgggatgttgctg
gatcaggcatttctggccggattgggaaattatctgcgggcggaaattctgtggctggca
aaattactgcccgatcataaagcgaatgaactgaatgacgcagaactggatgcgctggcc
gatgcctgtttgtccgtcgcgcgtttgtcctacgccacgcgcggcacaatggatgaaaat
gtgcatcatggcgcactgttccgtttcaaagttttcgggcggacggggaaaccctgcgcg
cgttgcggcgatccgattgaaaagggcagcgtgtcttcacggccatttttctggtgcccg
gtttgtcaggtgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system