KEGG   Rahnella sikkimica: BV494_13720
Entry
BV494_13720       CDS       T05331                                 
Name
(GenBank) molecular chaperone DnaK
  KO
K04043  molecular chaperone DnaK
Organism
rox  Rahnella sikkimica
Pathway
rox03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rox00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BV494_13720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rox03019]
    BV494_13720
   03110 Chaperones and folding catalysts [BR:rox03110]
    BV494_13720
   03029 Mitochondrial biogenesis [BR:rox03029]
    BV494_13720
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rox04147]
    BV494_13720
Messenger RNA biogenesis [BR:rox03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BV494_13720
Chaperones and folding catalysts [BR:rox03110]
 Heat shock proteins
  HSP70 / DNAK
   BV494_13720
Mitochondrial biogenesis [BR:rox03029]
 Mitochondrial protein import machinery
  Matrix
   MMC/PAM proteins
    BV494_13720
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Proteins involved in Fe-S cluster biogenesis
    BV494_13720
Exosome [BR:rox04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   BV494_13720
  Exosomal proteins of breast cancer cells
   BV494_13720
  Exosomal proteins of colorectal cancer cells
   BV494_13720
SSDB
Motif
Pfam: HSP70 MreB_Mbl FGGY_C RNA_pol_Rpb1_6
Other DBs
NCBI-ProteinID: AVF35923
UniProt: A0A2L1USJ8
Position
complement(2975419..2977320)
AA seq 633 aa
MGKIIGIDLGTTNSCVAIMDGTTARVLENAEGDRTTPSIIAYAADGETLVGSPAKRQAVT
NPQNTLFAIKRLIGRRFQDEEVQRDKGIMPYQIVGSDNGDAWIDIKGQKIAPPQISAEVL
KKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG
LDREIGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL
VEEFKKEQGMDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKV
TRAKLESLVEDLVNRCIEPLKVALKDAGLSVSDVQDVILVGGQTRMPMVQKKVAEFFGKE
PRKDVNPDEAVAIGAAVQGGVLAGDVKDVLLLDVTPLSLGIETMGSVMTPLITKNTTIPT
KHSQVFSTAEDNQSAVTIHVLQGERKRSSDNKSLGQFNLDGIQAAPRGQAQIEVTFDLDA
DGILHVSAKDKTTGREQKITIKASSGLTEEEIQKMVNDAEANAEADRKFEELVQTRNQAD
HLIHGTRKQLDEAGDKLPADDKTAVEEALKALEVSAKGEDKADIEAKIQALVQVSGKLME
MAQQQGQAEGGDNSAKKDDDVVDAEFEEVKDKK
NT seq 1902 nt   +upstreamnt  +downstreamnt
atgggtaaaattattgggatcgacctgggcaccaccaactcttgtgtagctatcatggat
ggcacgactgctcgtgtactggagaatgctgaaggcgaccgcaccactccttccatcatc
gcttatgcggcagatggcgagactctggtaggttctccggctaaacgtcaggcagtgacc
aacccgcagaacaccttgtttgcgatcaagcgcctgattggccgtcgcttccaggatgaa
gaagtacaacgcgataaaggcatcatgccttaccagatcgtaggctccgacaacggcgac
gcctggatcgacattaaaggtcagaaaattgcacctccgcagatctctgctgaagtgttg
aagaaaatgaagaaaaccgctgaagattatctgggtgagccagtgactgaagctgttatc
accgtacctgcatacttcaacgatgcacagcgtcaggcaacgaaagacgccggccgtatc
gcaggtctggaagttaaacgtattattaacgaacctaccgcagcggcactggcttacggc
ctggatcgcgaaatcggtaaccgcactatcgcggtatacgacctgggtggtggtactttc
gatatctctattatcgaaattgatgaagttgatggcgaaaaaaccttcgaagttctggca
accaacggtgatactcacctcggtggtgaagacttcgacagccgtctgatcaactacctg
gttgaagagttcaagaaagaacaaggtatggatctgcgtaacgatccgctggcgatgcaa
cgtctgaaagaagcggctgaaaaagcgaagattgaactgtcttctgctcagcagactgac
gtgaatctgccgtatatcactgcggatgcaaccggtccaaaacacatgaacatcaaagtg
acccgtgcaaaactggaatctttggtggaagacctggttaaccgttgtatcgaaccactg
aaagtggctctgaaagacgcaggtctgtctgtctctgacgttcaggacgtgatcctggtc
ggtggtcagacgcgtatgccaatggttcagaagaaagtggctgaattctttggtaaagaa
ccacgtaaagacgtgaacccggacgaagctgtggcaatcggtgcagcagttcagggtggt
gtgttggcaggtgatgttaaagacgttctgctgttggacgtaacgccgttgtctctgggt
atcgaaaccatgggcagcgtgatgactccgctcatcaccaagaacaccactatcccgaca
aaacacagccaggtgttctctactgcggaagacaaccagtctgcagtgaccatccatgtg
ttgcagggtgagcgtaagcgttcaagtgataacaaatctctgggtcagttcaacctggac
ggtattcaggcagcaccgcgcggtcaggcacagatcgaagtcaccttcgaccttgacgcc
gacggtatcctgcatgtgtctgcgaaagacaagacgaccggccgtgaacagaagatcacc
atcaaggcatcttctggtctgacggaagaagagatccagaaaatggtcaacgacgctgaa
gcgaacgctgaagctgaccgtaagtttgaagaactggttcagacccgcaaccaggcggac
cacctgatccacggaacccgtaagcaactggacgaagccggcgacaaactgccagctgac
gacaaaactgctgtagaagaagccctgaaagcactggaagtttctgctaaaggtgaagac
aaggctgatatcgaagcgaaaatccaggcgctggttcaggtttcaggcaaactgatggaa
atggctcagcagcaaggccaggccgaaggcggcgacaacagcgcgaagaaagatgacgac
gttgttgatgctgaattcgaagaagtgaaagacaagaaataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system