KEGG   Rhodopseudomonas palustris HaA2: RPB_0005
Entry
RPB_0005          CDS       T00321                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
rpb  Rhodopseudomonas palustris HaA2
Brite
KEGG Orthology (KO) [BR:rpb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rpb03032]
    RPB_0005
   03400 DNA repair and recombination proteins [BR:rpb03400]
    RPB_0005
Enzymes [BR:rpb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RPB_0005
DNA replication proteins [BR:rpb03032]
 Prokaryotic type
  DNA Topoisomerases
   RPB_0005
DNA repair and recombination proteins [BR:rpb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RPB_0005
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert HATPase_c_3
Other DBs
NCBI-ProteinID: ABD04717
UniProt: Q2J493
Position
5462..7903
AA seq 813 aa
MTEPARQPIAETPSPVPAEYGAESIRVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVD
NAIDEALAGHATAVEVVLNADGSVTVRDDGRGIPVDIHKGEGISAAEVIMTQLHAGGKFD
QNSYKVSGGLHGVGVSVVNALSSKLVLRVWRNGKEHIIEFAHGDAVAPLSVVGDANGRRG
TEVTFFASPETFTHIEYDFATLEHRLRELAFLNSGVNIVLSDMRHPVEKREEMRYEGGVT
EFVKYLDRNKKPMVPAPIVLAADLNGIGVEAALWWNETYHENVLCFTNNIPQRDGGTHLA
GFRAALTRQVNGYADSNAKKEKIALTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEV
RPVVENVLNEALAAWFEEHPAEAKVIVGKVIEAAAAREAARKARELTRRKGALDIASLPG
KLADCQERDPSKSELFIVEGDSAGGSAKQGRNREFQAVLPLRGKILNVERARFDKMLGSE
QIGTLITALGTGIGRDDFDIAKLRYHKIILMTDADVDGAHIRTLLLTFFFRQMPALIEGG
FLYIAQPPLYKVTRGKSEQYLKDERALEEYLIATGLDDCAFKIASGEVRGGRDLLALVED
ARVIRQTLHNLHGRYNRSVVEQAAIAGVLSPRITSDVATANEAAAYIARRLDALADEVER
GWIGRFVEGEGFHFERTVRGVKDVAMIDDALLGSADARKLDEYAAVLQEVYPRPGVLRRK
DAETAIHGPVSLFEAVTDAGRKGVALQRYKGLGEMNPSQLWETTLDTNARSLLQVKVREV
DEADDIFTKLMGDVVEPRREFIQENSLSATVDV
NT seq 2442 nt   +upstreamnt  +downstreamnt
atgactgaacccgcccggcagccgatcgccgaaaccccgtcgcccgttccggccgaatac
ggcgcggaatcgatccgggtgctgaagggcctcgacgctgtccgcaagcggccgggcatg
tatatcggcgacaccgacgacggctccggcctgcaccacatggtgtacgaagtcgtcgac
aacgccatcgacgaagcgctcgccggccacgccaccgcggtcgaagtcgtgctcaacgcc
gacggctcggtgacggtgcgcgacgacggccgcggcattccggtcgacatccacaagggc
gaaggcatttcggcggccgaagtcatcatgacccagctccatgccggcggaaaattcgac
cagaactcctacaaggtgtccggcggactgcacggcgtcggcgtctcggtggtcaatgcg
ctgtcgagcaagctggtcctgcgcgtgtggcgtaacggcaaagagcacatcatcgaattc
gcccatggcgacgcggtggcgccgctgagcgttgtcggcgacgccaatggccggcgcggc
accgaggtgacatttttcgcgtcgccggaaaccttcacccacatcgaatacgacttcgcg
acgctggagcatcgcttacgcgaactcgccttcctgaattccggcgtgaacatcgtattg
tccgacatgcgccacccggtcgagaagcgcgaggagatgcgctacgagggcggcgtcacc
gaattcgtcaaatatctcgaccgcaacaagaagccgatggtgccggcgccgatcgtgctg
gcggcggatctcaacggcatcggcgtcgaagccgcattgtggtggaacgagacctaccac
gagaacgtgctgtgcttcaccaacaacatcccgcagcgcgacggtggtacgcatctggcc
ggcttccgcgccgcgctgacgcggcaggtcaacggctatgcggacagcaacgccaagaag
gaaaagatcgcgctgaccggcgacgattgccgcgaaggcctcaccgcggtgctgtcggtg
aaggtgccggatccgaagttctcgtcgcagaccaaggacaagctggtgtcctcggaagtc
cggccggtggtcgagaacgtgctgaacgaagcgctcgcagcctggttcgaggaacatccc
gccgaagccaaggtcatcgtcggcaaggtgatcgaagccgccgccgcccgcgaagccgcg
cgaaaagcgcgcgagctgacgcggcgcaagggcgcgctggatatcgcctcgctgcccggt
aagctcgccgactgccaggagcgcgatccgtcgaaatccgaactgttcatcgtcgagggt
gactccgccggcggctccgccaagcagggccgcaaccgcgaattccaggccgtgctgccg
ctgcgcggcaagatcctcaatgtcgagcgcgcgcgcttcgacaagatgctgggctccgag
cagatcggcacgctgatcaccgcgctcggcaccggcatcggccgcgacgatttcgacatc
gccaagctgcgctaccacaagatcatcctgatgaccgacgccgacgtcgacggcgcgcac
atccgcacgctgctcttgacgttcttcttccggcagatgccggctctgatcgagggcggc
ttcctctacatcgcgcagccgccgctgtacaaagtgacgcgcggcaagtcggagcagtat
ctcaaggacgagcgcgcgctcgaggaatatctgatcgcgaccggactcgacgattgcgcg
ttcaagatcgcctccggcgaagtccgcggcgggcgggatctgctggcgctggtcgaggac
gcccgcgtgatccgccagacgctgcacaatctgcacggccgctacaatcgctcggtggtc
gagcaggcggcgatcgccggcgtgctcagcccgcggatcaccagcgacgtggcgaccgcc
aacgaagccgccgcctatatcgcgcgccggctcgacgcgctggccgacgaggtcgagcgc
ggctggatcggccgcttcgtcgaaggcgaaggcttccacttcgagcgcaccgtgcgcggc
gtcaaggacgtggcgatgatcgacgacgcgctgctcggctccgccgacgcccgcaagctc
gatgaatacgccgccgtgctgcaggaggtctatccgcgccccggcgtgctgcgccgcaag
gatgcggaaaccgcgatccacggcccggtcagcctgttcgaggcggtgaccgacgctggc
cgcaagggcgtggcgctgcagcgctacaaaggcctcggcgagatgaacccgagccagctc
tgggagaccacgctcgacaccaacgcccgctcgctgctgcaggtgaaggtccgcgaagtc
gacgaagccgacgacatcttcaccaagctgatgggcgacgtcgtcgaaccccgccgcgaa
ttcatccaggagaattcgctgagcgcgacggtggacgtgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system