KEGG   Rhodopseudomonas palustris HaA2: RPB_4080
Entry
RPB_4080          CDS       T00321                                 
Name
(GenBank) AMP-dependent synthetase and ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
rpb  Rhodopseudomonas palustris HaA2
Pathway
rpb00061  Fatty acid biosynthesis
rpb00071  Fatty acid degradation
rpb01100  Metabolic pathways
rpb01212  Fatty acid metabolism
rpb02024  Quorum sensing
Module
rpb_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rpb00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RPB_4080
   00071 Fatty acid degradation
    RPB_4080
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RPB_4080
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rpb01004]
    RPB_4080
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rpb04147]
    RPB_4080
Enzymes [BR:rpb01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RPB_4080
Lipid biosynthesis proteins [BR:rpb01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   RPB_4080
Exosome [BR:rpb04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RPB_4080
  Exosomal proteins of breast cancer cells
   RPB_4080
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: ABD08773
UniProt: Q2ISN7
Position
4651251..4652807
AA seq 518 aa
MNITHGLRRALQINADGLATVFNGRRRSWRDVGERVARLAAGLRALGVGEGERVAVLSMN
SDRYLELYLAAGWCGGVIVPLNIRWSALENEDALRDCRAVALVVDKAFAATGATLAQAIP
GLAMVFADDGDVPAGMKSYEDVIATNAPIPDAMRKAEDLAGIFYTGGTTGRSKGVMLSHG
NLMANALNALGEGLFPSTSVYLHAAPMFHLANGAAMYSLLLSGGSNVMVPSFTPEGVMAA
MQNDRVTDVLLVPTMIQMFVDHPALKSYDLSSLKNIIYGASPISEAVLARASAALPHVQF
TQAYGMTELSPIATLLHWKEHIGDGKAKGRQRAAGRATLGCEVRIVDADDQPVPYGTVGE
ICVRGDNVMMGYWERPEETARALAGGWMHTGDGGYMDEHGFVYVVDRVKDMIISGGENVY
SVEVENAVAQHPAVAQCAVIGIPHEAWGEQVHAVVVTKAGASVTADELIAHCKALIAGYK
CPRSVDITETPLPLSGAGKILKRELRQPYWENRERRVS
NT seq 1557 nt   +upstreamnt  +downstreamnt
atgaatatcacccacggcctgcggcgcgcgctgcagatcaacgccgacggcctcgccacc
gtgttcaacggccgccgccgcagctggcgcgacgtcggcgagcgcgtcgcccgcctcgcc
gccggcctgcgtgcgctcggcgtcggcgaaggcgagcgcgtcgccgtgctgtcgatgaat
tccgaccgctatctggagctgtatctggccgccggctggtgcggcggcgtgatcgtgccg
ctcaacatccgctggagcgcactggagaacgaggacgcgctgcgcgactgccgtgcggtg
gctctggtcgtcgacaaggcgttcgccgcgacaggcgcgacgctggcgcaagcgattcca
ggtctggcaatggtctttgccgacgatggcgatgtgccggcaggcatgaagagctacgaa
gacgtcatcgcgaccaacgcgccgatccccgacgcgatgcgcaaggccgaggacctcgcc
ggtattttctataccggcggcaccaccgggcgttccaagggcgtgatgctgagccacggc
aacctgatggccaacgcgctcaatgctttgggcgaaggtctgtttcccagcacctcggtg
tatctgcacgcggcgccgatgttccatctcgccaacggggcggcgatgtattcgctgctg
ctgtccggcggctccaatgtcatggtgccgtcgttcacgccggaaggcgtgatggcggcg
atgcagaacgaccgcgtcaccgatgtgctgctggtgccgaccatgatccagatgttcgtc
gatcatccggcgctgaagagctacgacctgtcgtcgctgaagaacatcatctacggcgcc
tccccgatcagcgaggcggtgctcgcccgcgccagcgccgcgctgccccacgtgcagttc
acccaggcctacggcatgaccgaattgtcgccgatcgccacgctgctgcactggaaggag
catatcggcgacggcaaggccaagggacggcagcgcgcggccggccgcgctacgctcggc
tgcgaggtccgcatcgtcgacgccgacgaccagccggtgccgtacggcaccgtcggcgag
atctgcgtgcgcggcgacaatgtgatgatgggctattgggagcgtccggaggagaccgcg
cgggcgctggcgggcggctggatgcacaccggcgacggcggctacatggacgagcacggc
ttcgtctacgtcgtcgaccgcgtcaaggacatgatcatctccggcggcgagaacgtctat
tcggtcgaggtcgagaacgcggtggcgcagcatccggccgtggcgcaatgcgcggtgatc
gggattccgcacgaggcctggggcgagcaggtccacgccgtggtcgtcaccaaggccggc
gcgagcgtcaccgccgacgaactgatcgcgcattgcaaggcgctgatcgccggctacaaa
tgcccgcgcagcgtcgacatcaccgagacgccgctgccgctgtcgggcgccggcaagatc
ctcaagcgcgaattgcgacagccctattgggagaaccgcgaacgccgcgtgagctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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