KEGG   Rhodopseudomonas palustris BisB18: RPC_3532
Entry
RPC_3532          CDS       T00336                                 
Name
(GenBank) conjugation TrbI-like protein
  KO
K20533  type IV secretion system protein TrbI
Organism
rpc  Rhodopseudomonas palustris BisB18
Pathway
rpc02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rpc00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RPC_3532
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rpc02044]
    RPC_3532
Secretion system [BR:rpc02044]
 Type IV secretion system
  Trb secretion system protein
   RPC_3532
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: ABD89071
UniProt: Q210W5
Position
complement(3925335..3926570)
AA seq 411 aa
MNGDRRQDDASDAFRSASDPVAAFQIRPERPRVTRLSRKVLMAGTGIALVAVSGAVFWAL
QNNRHRADAPEELYSTEHRTKADGLSGLPRDYAGIPRQATPLGPPLPGDLGRPMLNAGAA
SNTVIPAAPAADPEAQRRGQEIEAARLSRLFAPTNTRELPPIVPTPASATPPEASAVLNP
LPQPPADSTFAQNGQDRKLAFINASVDRRTTSPDRLAAPASPYVVQAGTVIPGALITGIR
SDLPGLITAQVSENVYDSPSGKFLLIPQGARLIGQYDSQVAFGQSRVLLVWTRLIMPNGK
SIVLERQPGADTAGYAGLEDEVDNHWGALFKAAMLSTLLSVGSEVGTSGSEDDVVQAIRR
GGSQSFNQVGQRVVSRNLDIQPTLTIRPGFPVRVIVNRDLVLAPYNQEAAK
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgaatggcgaccggcgacaggacgacgcctccgatgcgtttcggtcggccagcgatccg
gtcgcggcgtttcaaatccgaccagagcgaccgagggtgacgcggctctcgcgcaaggtg
ctgatggccggtaccgggattgcgctggtggcggtgtccggcgcggtgttctgggcgttg
cagaacaatcgccatcgtgcggacgctcccgaggagctctacagcacggagcatcgcact
aaggccgatggattgtccgggctgccacgggattacgccggcatcccgcgccaagcgacg
ccgcttggtccgccgctgcccggcgatctcgggcggcccatgctcaacgccggcgcggca
tcgaacacggtcatcccagctgcacccgcggcggatccggaggcgcagcggcggggccaa
gagatcgaggcggcgcggttgagccggttgtttgcaccgaccaacacccgagaactgcct
ccgatcgtgccaactccggcgtcggcaacaccacctgaagccagcgcagtgttgaatccc
ctcccacaaccgccggccgattcgaccttcgcgcagaacggccaggaccggaaactcgcc
ttcatcaacgcctcggtcgatcggcggacgacgagcccagaccggctggcagctccggcc
tcgccttacgtggtgcaggccggcaccgtcattcccggcgcgctgatcaccggcatccgc
tcggacttgccgggcctgatcaccgcccaggtctcggaaaacgtctatgacagcccgagc
ggcaagtttcttctcattccacaaggcgcgcggctgatcggccagtacgacagccaggtc
gctttcggtcagtcgcgcgtcctcctggtctggacccggctgatcatgccgaacggcaaa
tcgatcgtactggagcgccagcccggcgccgacaccgccgggtatgcgggactggaggac
gaggtcgacaaccattggggtgcgctgttcaaggcggcgatgctctcgacgctgctcagc
gtcggctccgaagtcggcaccagcggcagcgaggacgatgtcgtccaggcgatccgccgt
ggcggctcgcagagtttcaatcaggtcgggcaacgcgtcgtcagccgcaacctcgacatt
cagccgacgctcacgatccgccccggattcccggtgcgtgtgatcgtcaaccgcgacctg
gtgctggcgccatacaatcaggaggccgcaaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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