KEGG   Rhodopseudomonas palustris BisB18: RPC_3898
Entry
RPC_3898          CDS       T00336                                 

Definition
(GenBank) ATPase
  KO
K20530  type IV secretion system protein TrbE [EC:7.4.2.8]
Organism
rpc  Rhodopseudomonas palustris BisB18
Pathway
rpc02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rpc00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RPC_3898
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rpc02044]
    RPC_3898
Enzymes [BR:rpc01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     RPC_3898
Secretion system [BR:rpc02044]
 Type IV secretion system
  Trb secretion system protein
   RPC_3898
SSDB
Motif
Pfam: P-loop_TraG CagE_TrbE_VirB AAA_22 AAA_10 ABC_tran TraG-D_C DUF853 AAA_29 TrwB_AAD_bind AAA_16 FtsK_SpoIIIE CbiA
Other DBs
NCBI-ProteinID: ABD89424
UniProt: Q20ZL2
Position
complement(4327881..4330322)
AA seq 813 aa
MMNLSEYRHSTTCLADFLPWAALVGQGVVLNKDGSFQRTATFRGPDLDSAVPAELVGITA
RLNNALRRLGSGWAVFVEAQRHPASKYPECHFPDAASALVDLERRAQFEEEGAHFESSYF
LTFLYLPPAADVARAERLLYEGRDRDEGTDAREILGGFVDRTDRVLQLVEGFMPESAWLD
DQDTLTYLHSTISTKRYRIRVPETPMYLDALLADQPLTGGLEPMLGNAHLRVLTIVGFPT
TTTPGILDELNALAFAYRWSTRAIMLDKTDATKLLTKIRRQWFAKRKSIAAILKEVMTNE
AATLVDTDAQNKAMDADAALQELGSDAIGQAFVTATVAVWDGDPRAADEKLRLVEKVIQG
RDFTCMAESVNAVEAWLGSLPGHAYANVRQPPVSTLNLAHMIPLSAVWAGPLRDDHFDAP
PLFFARTEGATPFRFSLHVGDVGHTLVVGPTGAGKSVLLALMALQFRRYAGSQVFAFDFG
GSIRAAALAMGGDWHDLGGALSDNATEPVALQPLALIDDAAERGWAAEWIGNILARETIR
ITPEAKEHLWSALSSLASAPAPERTLTGLSVLLQSQTLKRALQSYCLGGPYGRLLDAEAE
RLGEGAVQAFETEGLIGTSAAPAVLGYLFHRIERRLDGRPTLLIIDEGWLALDDEGFAGQ
LREWLKTLRKKNASVIFATQSLSDIDGSAIAPAIIESCPTRLFLPNERAIEPQITAIYRR
FGLNDRQIEILARATPKRDYYCQSRRGNRLFELGLGGVALALAAASSKADHTLIESVIAE
HGRDGFLAAWLTQRGAGWAVDFIPRLSTKEPSA
NT seq 2442 nt   +upstreamnt  +downstreamnt
atgatgaatctttcggagtatcggcactcgacgacatgcctcgccgactttctgccctgg
gccgcgttggtcggtcagggcgtggtgttgaacaaggacggatctttccagcgaaccgca
acgtttcgcgggccggacctggattccgccgtgccggccgaactggtcggtattacggca
cgcttgaacaatgccttgcgccggctggggtcgggatgggccgtgttcgtcgaggcgcag
cgccatcccgcgagcaaatatcccgagtgccattttccggatgctgcatcggctttagtt
gatctcgagcgccgcgctcagttcgaggaggagggcgcgcacttcgaatccagctacttc
ctgactttcctctatctgccgccggccgccgatgtcgcgcgcgccgagcgcttgctgtac
gaggggcgcgatcgcgacgaaggcaccgatgcacgcgagatattgggcggtttcgtcgat
cgcaccgaccgggtgcttcaactggtcgagggttttatgcccgagagcgcttggctcgat
gaccaggacaccctgacctatctgcattccacgatctcgaccaagcgctaccggatcagg
gttccggaaacgccgatgtatctcgatgcactgctggccgaccagccgctgaccggtggg
ttggagccgatgctcggcaatgcgcatctgcgggtgctgaccatcgtgggtttcccgacc
accaccactcccggcatcctcgacgaattgaatgcactggccttcgcctatcgctggtcg
acccgcgccatcatgctcgacaagaccgacgccacaaagctgttgacgaagattcggcgg
cagtggttcgccaagcgcaaatcgattgcggccatcctcaaggaggtgatgaccaacgag
gccgcgaccctggtcgataccgacgcccagaacaaggcgatggatgcggacgcggcgttg
caggaactcgggtccgacgcgatcgggcaggcctttgtcacagcaacggtcgcggtatgg
gacggcgacccgcgtgccgctgacgaaaagctccgccttgtagagaaagtaattcaaggc
cgcgacttcacctgcatggctgagagcgtcaacgccgtcgaagcctggctcggatcgctg
ccaggtcacgcctacgccaatgttcgccagccgccggtttcgacgctgaatctggcccac
atgattccgctctcggcggtatgggccggaccgctccgagacgatcattttgatgctccg
ccgctgttctttgcccgcaccgagggcgcgaccccgttccggttttcgctgcacgttggc
gatgttgggcatacgctggtcgtcggtccgaccggcgccggcaagagtgtgctgctggcg
ctgatggcgctgcagttccggcgttacgccggttcacaggtgttcgctttcgatttcggc
ggctcgatccgggccgccgcgctcgcgatgggcggcgattggcacgatctcggtggcgcg
ctctccgacaatgcgaccgaaccggtcgcgctgcagccgctggctctgatcgatgacgcc
gcggagcgcggatgggcggcggaatggatcggcaacattttggcgcgtgagaccatccgg
atcaccccggaagcgaaagagcatctgtggtcggcgctgtcgtcgctggcgtctgcgccg
gcaccggagcgcacgctgaccggcctgtcagtgctgctgcagtcgcagactctgaagcgc
gcgctgcaatcctattgcctcggcggtccctacggccggctgctcgatgccgaggctgaa
cggctgggtgagggcgcagtccaggccttcgagaccgaggggctgatcggcaccagcgcc
gcgcccgcggtgctcggctatctgtttcatcgcattgagcggcggctcgatggccggccg
accttgttgatcatcgacgaaggctggctcgcgcttgatgacgagggctttgccggccag
cttcgcgagtggctaaagacgctgcgcaagaagaacgcttcggtaatcttcgccacccaa
tcactatcggacatcgatggctcggcgatcgcaccggccatcatcgagagctgtccgaca
aggttgttcctgcccaacgagcgcgcgatcgaaccgcagatcaccgcgatctatcgccgc
ttcggcctgaacgaccgccagatcgagatcctggcccgggccacgccaaagcgcgattac
tactgccagtcgcggcgcggcaaccggctgttcgagcttggcctcggcggtgtcgcgctg
gctttggcggccgcgtcctcgaaggccgatcataccttgatcgagagcgtcatcgccgaa
catggccgtgacggcttcctcgccgcctggctgacccagcgcggcgccggctgggcggtc
gatttcatcccaaggctttccacaaaggagccgtcagcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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