KEGG   Rhodopseudomonas palustris BisB5: RPD_0079
Entry
RPD_0079          CDS       T00345                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
rpd  Rhodopseudomonas palustris BisB5
Brite
KEGG Orthology (KO) [BR:rpd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rpd03016]
    RPD_0079
Enzymes [BR:rpd01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     RPD_0079
Transfer RNA biogenesis [BR:rpd03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    RPD_0079
 Prokaryotic type
    RPD_0079
SSDB
Motif
Pfam: PseudoU_synth_1 AAA_25
Other DBs
NCBI-ProteinID: ABE37319
UniProt: Q13F20
Position
complement(94698..95435)
AA seq 245 aa
MPRYKLTIEYDGAPFCGWQLQPVLPSVQGALEAAALATCGEAVRVHGAGRTDAGVHALGQ
VAHLDIAKPFRADRLRDALNAHVRPYPVAVLSTEIVPDSFEARFSAIRRHYRYRIVNRRS
NLALEIGKVWRVPKPLDTDAMHRAAQVLIGKHDFTTFRDTECQAASPEKTLDVLDVVRSG
DCVDIITSARSYLHSQVRSMVGSLVWVGEGRWSADDLAAALAARRRSACGPVAPPDGLYL
VKVDY
NT seq 738 nt   +upstreamnt  +downstreamnt
atgccccgctacaagctcaccatcgaatatgacggcgctccgttctgcggctggcagttg
cagccggtgctgccgtcggtgcagggcgcgctggaggcggcggcgctggcgacgtgcggc
gaggcggtgcgcgtgcacggcgcgggacgcacggacgccggcgtccatgcgctggggcag
gtcgcccatctcgacattgccaagccgtttcgcgccgaccggctgcgcgacgcgctgaac
gcccatgtgcgaccgtatccggtcgcggtgctgtcgacggagatcgtgccggacagtttc
gaggcgcggttctccgcgatccggcggcactatcgctatcgcatcgtcaaccgccgctcg
aatctcgcgctcgagatcgggaaggtgtggcgggtgccgaagccgctcgacaccgacgcg
atgcatcgcgccgcgcaggtgctgatcggcaagcacgacttcaccaccttccgcgacacc
gaatgccaggcggcctcgccggagaagacgctcgacgtgctcgatgtggtgcgcagcggc
gactgcgtcgacatcatcacctcggcgcgctcttatctacacagccaggtgcgttcgatg
gtcggctcgctggtgtgggtcggcgagggccgctggagcgccgatgatctcgccgctgcg
ctggccgcccgccgccgctccgcctgcggcccggtcgcgccgccggacgggctgtatctg
gtgaaggtggattactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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