KEGG   Rhodopseudomonas palustris BisB5: RPD_3129
Entry
RPD_3129          CDS       T00345                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
rpd  Rhodopseudomonas palustris BisB5
Brite
KEGG Orthology (KO) [BR:rpd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rpd03009]
    RPD_3129
Enzymes [BR:rpd01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     RPD_3129
Ribosome biogenesis [BR:rpd03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    RPD_3129
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ABE40355
UniProt: Q134Y4
Position
complement(3480278..3481612)
AA seq 444 aa
MSRRTKKPLAKRGPGGDRPKAGSRPAAKAGPVRGNRSEDGRPISARPQREPRGERAERPA
AKRPAAERSAADRPASARPGRPPARSASSSRPPRAQRPEPAPEPEKIVPEPALLPTKVET
VVVTADENNMRVDRFLEARFPGLSFSHIQRIVRKGELRVNGKRADSKDRLEEGQSVRIPP
LKLDTPKLPGHLSEAEQKTLQALKEMTLYEDADVLVLNKPLGLAVQGGSGTTRHIDLMLE
VMRDSKGQKPRLVHRIDKETAGCLLVAKTRFAATALTGSFRSRSARKIYWALVAGVPKPK
QGRISTYLAKDESEDDSIMRVAAHGDDGASHAVTYYAVVETSATKLAWVSLKPVTGRTHQ
LRAHMAHIGHAIIGDPKYFNIENWKLPGGLQNRLHLLARRIVIPHPRGGVIDVSAPLPPH
MLQSWNLLGLEHDRFDPIEHAPEE
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagccgtcgtacgaaaaaacccctcgccaagcgcggccccggcggcgatcgccccaaa
gccggcagccggccggccgcgaaggccggtccggtgcgcggcaatcgcagcgaggacggc
cgtccgatctcggcgcggccccagcgcgagccgcgtggcgagcgcgccgagcggcctgcc
gcaaagcgccccgccgctgaacgttccgccgccgaccggccggcgagcgcgcggcccggc
cgaccgccggcgcgatctgcgtcgtcatcgcgcccgccgcgcgcgcaacgcccggagcct
gcgcccgagccggaaaagatcgtccccgagccggcgctgctgccgaccaaggtcgagacc
gtcgtcgtcaccgccgacgagaacaacatgcgggtcgaccgcttcctcgaggcgcggttt
ccgggtctgtcgttctcccacatccagcgcatcgtccgcaaaggtgagctgcgcgtcaac
ggcaagcgcgccgacagcaaggatcggctggaggagggccagagcgtgcggattccgccg
ctcaagctcgatacgccgaagctgcccgggcatctgtccgaagccgagcagaagaccctg
caggcgttgaaggagatgacgctgtacgaggacgccgacgtgctggtgctgaacaagccg
ttggggcttgcagtgcagggcggcagcggcaccacgcggcacatcgatctgatgctcgag
gtgatgcgcgacagcaagggccagaagccgcgcctggtgcatcgcatcgacaaggaaacc
gccggctgcctcctggtcgccaagacccgcttcgccgccaccgcgttgactggatcattt
cgctcgcgttcagcgcgaaaaatctactgggcgctggtcgccggcgtgccgaagccgaag
cagggccggatctcgacctatctggccaaggacgagagcgaggacgacagcatcatgcgg
gtcgccgcccatggcgacgacggcgccagccatgcggtgacgtactacgcggtggtcgag
acctcggcgaccaagctcgcctgggtgtcgctgaagccggtgacgggccgcacccatcag
ctccgcgcccatatggcgcatatcggccacgccattatcggcgatccgaagtacttcaac
atcgagaactggaagctgcccggcggcctgcagaaccggctgcatctgttggcgcgacgg
atcgtgattccgcatccgcgcggcggcgtgatcgacgtctcggcgccgctgccgccgcat
atgctgcagtcgtggaacctgctcgggctggagcacgaccggttcgatccgatcgagcat
gcgccggaagaatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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