KEGG   Rhodopseudomonas palustris BisB5: RPD_4116
Entry
RPD_4116          CDS       T00345                                 
Name
(GenBank) protein of unknown function DUF558
  KO
K09761  16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Organism
rpd  Rhodopseudomonas palustris BisB5
Brite
KEGG Orthology (KO) [BR:rpd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rpd03009]
    RPD_4116
Enzymes [BR:rpd01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.193  16S rRNA (uracil1498-N3)-methyltransferase
     RPD_4116
Ribosome biogenesis [BR:rpd03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    RPD_4116
SSDB
Motif
Pfam: Methyltrans_RNA PUA_4
Other DBs
NCBI-ProteinID: ABE41335
UniProt: Q131A4
Position
4580822..4581577
AA seq 251 aa
MSRYDFRSPRLFVDAALAPGARVPLDRDQSNYLGNVLRLGAGAPVLTFNGRDGEWRAAIA
GRKRPEELEVTDQTRPQDRLPDLTYVFAPLKHSRLDYMTQKAVEMGAGRLQPVLTRHTQV
HRLNTDRMRANAIEAAEQCGILSVAAVEESIALERWLAARADGGRLLAFCDEDAEIADPV
AALQGARATAAQGIDLLVGPEGGFSNEERELLLRQPNILRLALGPRIMRADTAAVAALAL
VQAVIGDWSGN
NT seq 756 nt   +upstreamnt  +downstreamnt
atgtcccgatatgattttcgcagcccccgtttgttcgtcgacgccgcgctcgcccccggt
gcacgagtgccgctcgatcgcgaccagagcaattatctcggcaatgtgctgcggctgggc
gcaggcgcgcccgttctgaccttcaacggccgcgacggcgaatggcgcgccgcgattgcc
ggccgcaagcggcccgaggaactggaggtgacggaccagacccgtccgcaggatcgcctg
cccgatctgacctatgtgtttgcgccgctgaaacattcgcggctggattatatgacgcag
aaggccgtcgaaatgggcgccggccggctgcagccggtgctgacgcggcacacccaggta
caccggctcaacaccgaccggatgcgggccaatgcgatcgaagcggccgaacaatgcggc
attctcagcgtcgcagcggtcgaggagtcgatcgcgctggagcgctggctcgccgcgcgc
gccgatggcggccgtctgctggcgttctgcgacgaggacgcagagatcgccgatccggtc
gcggcgctgcagggcgcgcgcgccaccgcggcgcagggaatcgacctgctggtcggcccg
gaaggcggattttccaacgaggaacgtgagcttctgctgcggcagccgaacattctgcgg
ctggcgctcgggccgcggatcatgcgggccgacaccgccgcggtcgcggcgctggcgctg
gtccaggccgtgatcggcgactggagcggcaattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system