KEGG   Rhodopseudomonas palustris BisA53: RPE_2827
Entry
RPE_2827          CDS       T00400                                 
Name
(GenBank) integration host factor, alpha subunit
  KO
K04764  integration host factor subunit alpha
Organism
rpe  Rhodopseudomonas palustris BisA53
Brite
KEGG Orthology (KO) [BR:rpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rpe03032]
    RPE_2827
   03036 Chromosome and associated proteins [BR:rpe03036]
    RPE_2827
   03400 DNA repair and recombination proteins [BR:rpe03400]
    RPE_2827
DNA replication proteins [BR:rpe03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    RPE_2827
Chromosome and associated proteins [BR:rpe03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    RPE_2827
DNA repair and recombination proteins [BR:rpe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      RPE_2827
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: ABJ06764
UniProt: Q07MS0
Position
3177703..3178044
AA seq 113 aa
MTGTGKTVTRVDLCEAVYQKVGLSRTESSAFVELVLKEITDCLEKGETVKLSSFGSFMVR
QKGQRIGRNPKTGTEVPISPRRVMVFKPSAILKQRINGQANGSMSNSDQAETD
NT seq 342 nt   +upstreamnt  +downstreamnt
atgaccggaaccggaaagaccgtcacgcgcgtcgatctgtgcgaagccgtctaccaaaag
gtggggctgtcgcgcacggaatcgtctgcgtttgtcgaactcgttttgaaagaaatcacc
gattgcctggagaagggcgagacggtgaaactgtcgtcgttcggctccttcatggttcgg
cagaagggccagcgcatcggccgcaatccgaaaaccggcaccgaggtgccgatttcgccg
cgccgggtgatggtgttcaagccgtccgcaatcctgaagcagcgcatcaacggccaggcc
aacggcagtatgagcaattctgaccaggccgagacggactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system