KEGG   Rhodopseudomonas palustris BisA53: RPE_4422
Entry
RPE_4422          CDS       T00400                                 
Name
(GenBank) phage SPO1 DNA polymerase-related protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
rpe  Rhodopseudomonas palustris BisA53
Pathway
rpe03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rpe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RPE_4422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpe03400]
    RPE_4422
Enzymes [BR:rpe01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     RPE_4422
DNA repair and recombination proteins [BR:rpe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     RPE_4422
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ABJ08346
UniProt: Q07I88
Position
4955109..4955930
AA seq 273 aa
MMPDHNLTVRELLAFYLEAGVDCALADEPVNRLTDESDSALVARPVARALPAAMPLAPML
APAQPLAPAPDQAISSAREAARSAPTLEALRDLLERFDGCALKSTATRLVFADGNPQARI
MLVGEAPGRDEDIEGLPFVGRSGKLLDLMLAAIGLDRSQVYIANVIPWRPPGNRTPTPQE
TQICLPFIKRQIELVDPDVLVTLGNPSTQAILSTREGIMRTRGRWIDYDTGRRSIRALPT
FHPAYLLRQPSYKRMSWQDLRAIATALESLASA
NT seq 822 nt   +upstreamnt  +downstreamnt
atgatgcctgaccacaacctgaccgtccgggaactgctggccttctatctcgaggccggg
gtcgattgcgcgctcgcggacgaaccggtcaatcggctcaccgacgaaagcgacagcgcg
ctcgtcgcccgtccggtcgcacgggcgttgccggcggcgatgccgctggcgccgatgctc
gcgccggcacagccgctcgcaccagcgccggaccaggcgatctcctcggcacgcgaagcc
gcccgcagcgcaccgacgctggaggcgctgcgcgacctgctggaacgcttcgacggctgc
gcgctgaaatccaccgcgacgcggctggtgttcgccgacggcaatccgcaggcgcggatc
atgctggtcggcgaggcgcccgggcgcgacgaggacatcgagggcctgccgttcgtcggc
cgctcgggcaaattgctggatttgatgctggcggcgatcgggctcgaccgcagccaagtc
tatatcgccaacgtcatcccgtggcggccgccgggcaatcgcacgccgacgccgcaggag
acccagatctgcctgcccttcatcaaacgccagatcgaactggtcgatcccgacgtgctg
gtgacgctcggcaatccctcgacgcaagcgatcctgtcgacccgcgagggcatcatgcgg
acccgcggccgctggatcgattacgacaccggccgccgcagcatccgcgcgctgccgacc
tttcacccggcctatctgttacgccagccgagctacaagcggatgtcgtggcaggatctg
cgcgcgatcgcgaccgcgctggaatcgcttgcgtctgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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