KEGG   Ralstonia pickettii 12D: Rpic12D_1815
Entry
Rpic12D_1815      CDS       T00925                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
rpf  Ralstonia pickettii 12D
Brite
KEGG Orthology (KO) [BR:rpf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rpf03016]
    Rpic12D_1815
Enzymes [BR:rpf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     Rpic12D_1815
Transfer RNA biogenesis [BR:rpf03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Rpic12D_1815
 Prokaryotic type
    Rpic12D_1815
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: ACS63097
UniProt: C6BJH4
Position
1:complement(1931906..1932730)
AA seq 274 aa
MTRIALGIQYDGAAFSGWQSQPHGNTVQDVLESALRQFAGVALPTTVAGRTDAGVHALGQ
VVHLDTDLVREPFSWVRGTNAFLPPTVAVRWAQEMPEGFHARFSAHRRTYYYALTFGPTR
APLLEDKAGYVMLPPGQSLDVEAMNEAAQVLVGEHDFSSFRAAECQAKSPVKTMYSVEVR
GEGEWVFVRIRGSAFLHHMVRNIMGCLVAIGRGRQPVSWMGDVLAARSRVAAAPTFMPDG
LYLAEVGYPDAFSLPASPASSSLFRGVFDEHAGL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgacgcgcatcgcgcttggcatccagtacgacggtgccgcgttttcgggttggcaatcg
cagccgcacggcaataccgtgcaagacgtgctggagtcggcgctgcggcaatttgccggc
gtggcgctgccgactacggtggccggccgcaccgatgccggtgtgcatgcgctgggccag
gtggtgcatctggataccgatctcgtgcgcgagccgttttcgtgggtgcgcggcaccaac
gcctttctaccccccacggtggccgtgcgatgggcgcaggagatgccggagggtttccac
gcgcgattctccgcgcaccgccgcacgtattactacgcactgacctttggtccgacgcgg
gcaccgctgctcgaagacaaggcgggctacgtgatgcttccgccaggccaatcccttgac
gttgaagccatgaacgaggcggcccaggtactggtcggcgagcacgatttctcgtccttc
cgcgcggccgaatgccaagccaagtcgcccgtcaaaacgatgtattcagtggaggtgcga
ggcgagggcgaatgggtgttcgtgcgcattcgcggcagcgcgttcctgcaccacatggtg
cgcaacatcatgggctgcctcgtggcgatcgggcgcggccgccagccggtgtcctggatg
ggcgatgtgctggccgcccgcagccgcgtggccgccgcgccaactttcatgcccgacggc
ctgtatctcgccgaggtcggctatcctgatgctttctcgttgccggcgtctccggcatcg
tccagcctgtttcgcggcgtgttcgacgagcacgccggcctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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