KEGG T00925: Rpic12D

Ralstonia pickettii 12D: Rpic12D_4754

Entry

Rpic12D_4754      CDS       T00925

Name

(GenBank) hypothetical protein

K20531

type IV secretion system protein TrbF

Organism

rpf Ralstonia pickettii 12D

Pathway

rpf02024

Quorum sensing

Brite

KEGG Orthology (KO) [BR:rpf00001]
09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rpic12D_4754
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rpf02044]
    Rpic12D_4754
Secretion system [BR:rpf02044]
Type IV secretion system
  Trb secretion system protein
   Rpic12D_4754

SSDB

Motif

Pfam:

VirB8

Other DBs

NCBI-ProteinID:

ACS65989

UniProt:

C6BQE2

Position

pRp12D01:98861..99559

AA seq 232 aa
MLFKKKEKDVSVLMAGNAGPITAYDRAKREFFEIIGSSQANSARWFIVAMVMGIGMILVS
LNHYRLMPLKTIVPYIVHEQSDGSVANGGAVAASNFTPDRNMRSFFLRSWAEQVLTIDQF
TTSKGLKAALALCRGTCLAELNKLVTDDDVWGKLARNPQYTRVVHVKSVDPGENNIGFIF
LNTVSNSGDGVLATKQYRLTVHYSIQPPTKEEEIATNPVGIFVTHFARVEDL

NT seq 699 nt +upstreamnt +downstreamnt
atgctgttcaagaagaaggaaaaagatgtcagtgtattgatggcgggcaatgccgggccg
atcactgcatacgaccgcgcaaagcgcgagttcttcgaaatcattgggtccagtcaagca
aactcggcccgttggttcatcgtcgcgatggtgatgggaattgggatgatcctcgtttcg
ttgaatcactaccggctcatgcctctcaagacgatcgttccgtacatcgtgcacgagcag
agcgacggaagcgttgccaacggtggtgcggtagcagcctccaacttcacgcccgatcgc
aacatgcggtcattcttcttacgctcgtgggcagagcaagttctgacaatcgaccagttc
acgacgtccaaaggtctcaaagcagcactggcactgtgccgtggaacgtgtttggcggag
ctcaacaagctcgttaccgacgacgatgtatggggcaagttggcgaggaatcctcagtac
acgcgtgtcgtgcacgtcaagagcgttgacccaggcgagaacaacatcggcttcattttt
ctgaataccgtttccaacagcggtgatggtgtgctcgcgacaaagcaataccgtctcacc
gtgcactactcgatccagcctccgaccaaggaagaggagatcgcaacgaatcctgtcggt
atttttgtcacacatttcgcgcgcgtcgaggacctctga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (4)   

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