KEGG T04590: AMC79

Rhizobium phaseoli: AMC79_CH00028

Entry

AMC79_CH00028     CDS       T04590

Name

(GenBank) double-strand break repair helicase AddA type protein

K16898

ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]

Organism

rpha Rhizobium phaseoli

Brite

KEGG Orthology (KO) [BR:rpha00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpha03400]
    AMC79_CH00028
Enzymes [BR:rpha01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AMC79_CH00028
DNA repair and recombination proteins [BR:rpha03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     AMC79_CH00028

SSDB

Motif

Pfam:

UvrD-helicase UvrD_C UvrD_C_2 AAA_19 PDDEXK_1 DEAD

Other DBs

NCBI-ProteinID:

ANL95890

Position

complement(23792..27343)

AA seq 1183 aa
MSEVSDLPDSDDPGAWIGWTTIQQAIASDPVRSAWVSANAGSGKTHVLTQRVIRLLLAGA
RPSAILCLTYTKAAASEMSNRVFERLADWVVLDDDDLSRRLMQIEGTAPDRIKLAEARRL
FAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAAAALLSDARRALLTAT
APEEGSLLAEAFAYVLNLGDESGLENLLGDIVANRNAIRRFTAAAEQQDGVDMVLRKRLG
LAADDTERGIAAQYWPLPELAGGTLELYLSMADQKGGAKAQEVAYGLRLAGRERDDARRA
AMLEKIFLTAKGEQKTDSQFLVKAMLAEAPQLTEAIATARAHVAASRDRLKLMRMHGATQ
AALVLADRLNHDYEELKKQRSQLDFEDLITRTADLLTKSGVGPWIHYKLDRGIDHILVDE
AQDTSPIQWSVIQSLAEDFFSGESARPIVRTLFAVGDEKQSIYSFQGARPERFSEESDRT
RRRVSDSGQSFSSVRLPLSFRSTADVLEAVDEIFRTSDNARGLSAVGEPVVHRSSRIGHP
GAVDLWEMVAPEAVVKEEDWTAPFDATPESAPAAILARRIAHSIGALVGRETIVDKGKER
LIEAGDILVLVRKRDAFVNALTRALKRRGDIPVAGADRLVLTSHIAVQDLLALGRFLLLP
EDDLSLAAVLKSPLFDLSEEDIFAIAALRGDNESVWSHLRKFAADGNERFRAAVEKLELF
LRQSKNLSVHDFYARLLGSHGGRRQFLARLGTEVSDILDEFLTFTLDHESSGLPGLQSFI
STLELEAPEVKREQDKGRNEVRIMTVHASKGLEAPIVFLVDGGSKAFTHTHLPKLRLIET
DPDEPPMPAWVPVADLGNSLTQNDAARIQILAEEEYRRLLYVAMTRAADRLVVCGYRGVR
ANNDTWHMMISTALSEGHPHVEAASFSDPDGEWPGIKWRVPRVERSFERINRSEARDDEI
SLPEGLLRPLPPQAELPRPLSPSGAGTIIDEDEGGLVVASPLFSEKQRSDRSLEKGRLLH
RMLQALPDIPPDERPGAAQRYGERTARFWPEAERRKLVDSVLKLLDEKDLQPVLGEQARP
EVSIMGTLMLDGRRYAVSGRIDRLAVLSDRVVILDYKTNRVPPATEEAIPFAHRAQLAIY
REILAPLYPGKRIDCMLVYTENASLYTLSEKALGLALAGLETK

NT seq 3552 nt +upstreamnt +downstreamnt
atgagtgaggtaagcgaccttcctgatagcgacgatcccggggcctggatcggctggacc
acgatccagcaggcgatcgcctccgatccggtgcgctcggcatgggtttcggccaatgcc
ggttccggcaagacgcatgtcctgactcagcgcgtcatccggcttctgctcgccggcgcg
cggccttcggccattctctgcctcacctacaccaaggccgcggcctcggaaatgtcgaac
cgcgtcttcgaacggctggcggactgggtggtgcttgacgatgacgatctcagccggcgg
ctcatgcagatcgaagggacggcgcccgaccgcataaaactggccgaggcccggcggctg
tttgccaaggcgctggagacgccgggcggcttgaagatccagacgatccacgccttttgc
gaggcgctgctgcaccagttcccactggaggccaatgtcgccgggcatttctcggttctc
gacgatcgcgccgccgcagcactgctttccgatgcgcgccgggcgctgctgacggcgacg
gcgccggaagaaggcagcctccttgcagaggctttcgcctacgtgctcaatctcggcgac
gaatccggcctggagaacctgctcggcgacattgtcgccaaccgcaacgccatccgccgc
tttaccgcggccgccgaacagcaggacggcgtggacatggttctgcgcaaaaggctcggt
cttgccgccgatgacacggagcgaggcattgcggcacagtactggccgctgccggaactt
gcaggcggcacgctggaactttatctgtcgatggccgatcaaaagggtggcgccaaggcg
caggaggttgcctatggcctcaggctcgccggccgggaacgggatgacgccagacgcgcc
gcaatgctcgagaagatttttctgacggcgaagggcgaacagaaaacggactcgcagttc
ctggtcaaggccatgcttgccgaagcgccgcaattgacggaggccatcgccaccgcccgc
gcgcatgtcgcggcaagccgtgaccggctgaaactgatgcggatgcacggcgccacgcag
gccgcgctcgtgctcgccgaccggctgaatcacgattacgaggagctgaagaaacagcgc
agccaactcgatttcgaggatctgatcacccgcaccgccgaccttttgacgaaaagcggc
gtcggtccctggatccattacaagctcgaccggggtatcgatcacatccttgtcgacgag
gcgcaggataccagtccgatccaatggagcgtcatccagtcgctcgccgaggatttcttt
tccggcgagagcgcccggccgatcgtgcgcacgctgtttgccgtcggcgacgagaaacag
tcgatctattcctttcaaggggcgcggcccgagcgtttttccgaagagagcgaccggacg
cggcggcgcgtctccgacagcgggcagagcttttcatccgtgcggctgccgctctccttc
cgctcgaccgccgacgtactcgaggccgtcgacgagatcttcagaacatccgacaatgcg
cgcggcctcagcgccgtcggcgagccggtcgtgcatcgttccagccgcatcggacatccc
ggcgccgtcgacctctgggaaatggtcgcgccggaggcggtggtgaaggaagaggattgg
acggcccccttcgatgcgacgccggaaagcgcgccggccgcaattctggcgcgacggatc
gcccattcgatcggcgcgctggtcggccgtgaaacgatcgtcgacaagggcaaggagcgg
ctgatcgaggccggcgatattctggtgctggtgcgcaagcgcgacgccttcgtcaatgcg
ttgacacgcgccttgaagcgtcgcggcgatattcccgtcgccggcgccgacaggctggtg
ctgaccagccatatcgccgtgcaggatctgctggcgctcggccgcttcctgcttctgccg
gaggatgacctgtcgctcgcggccgtgctgaagagcccgcttttcgatctctccgaagag
gacatctttgccatcgcggcactgcggggcgacaatgagagcgtctggagccatctcagg
aaattcgccgccgacggtaacgagcgtttccgcgcggcagtcgaaaagctggaactgttc
ctccgacaatcgaaaaacctatcggtgcatgatttctatgcgcgcctgctgggcagccac
ggcgggcggcggcagtttcttgcccgcctcggcaccgaagtcagcgatatcctcgacgaa
ttcctgaccttcaccctcgaccatgagagctccggccttcccgggctgcaatccttcatc
tcgacgctcgagctcgaagcgcccgaggtgaaacgcgagcaggacaagggacgcaatgag
gtcaggatcatgaccgtgcatgcctcaaagggtcttgaagcaccaatcgttttcctggtc
gacggcggctcaaaagccttcacgcatacgcatctgccgaagcttcgcctgatcgaaacc
gacccggacgaaccgccgatgcctgcctgggttccggtcgccgacctcggcaattcgctt
acgcagaacgatgctgcgcgcatccagatactggccgaagaggagtatcgccggctgctc
tatgtcgccatgacgcgggccgccgaccggctggtcgtctgcggctatcgcggcgtgcgc
gccaataacgacacctggcatatgatgatttccactgcgctcagcgaaggccatccgcac
gtggaggcggccagcttctctgaccccgacggggaatggcccggtatcaaatggcgcgtg
ccgcgggtggagcggagcttcgagcgtatcaaccgcagcgaggcgcgcgacgacgaaatc
agcctgccggaaggcctgttgcggccattgccgccacaggcggagctgccccggcctctc
agcccttccggcgccggcacgatcatcgacgaggacgaaggcggcctggttgtcgcttcg
ccgctcttttcggagaagcaacgcagcgatcgctcgctggagaaaggcaggctgctgcat
cgcatgctgcaggcgcttcccgatattccgccagacgaacggcccggtgcggcgcagcgt
tatggcgaacggacagcccgtttctggccggaggccgaacggcgcaagctggtcgattcg
gttctgaaactattggacgagaaggacttgcagcccgtcctcggcgagcaggcccggcct
gaggtctcgatcatggggacattgatgctcgatggcagacgctatgccgtctccggccgc
atcgatcggctggcggtgctttccgatcgtgtcgtcatcctcgattacaaaaccaatcgg
gtgccgccggcgaccgaagaagccatccccttcgcgcatcgggcacagctggcgatctat
cgcgagatcctggcgccgctctatcccggcaagcgcatcgattgcatgctcgtctatacc
gagaacgcctcgctctacacgctgagcgaaaaggcgctcggtttggcgcttgcaggactg
gagacaaagtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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