KEGG   Rhizobium phaseoli: AMC79_PD00560
Entry
AMC79_PD00560     CDS       T04590                                 
Symbol
groEL-3
Name
(GenBank) chaperonin GroEL 3
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
rpha  Rhizobium phaseoli
Pathway
rpha03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rpha00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AMC79_PD00560 (groEL-3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rpha03019]
    AMC79_PD00560 (groEL-3)
   03110 Chaperones and folding catalysts [BR:rpha03110]
    AMC79_PD00560 (groEL-3)
   03029 Mitochondrial biogenesis [BR:rpha03029]
    AMC79_PD00560 (groEL-3)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rpha04147]
    AMC79_PD00560 (groEL-3)
Enzymes [BR:rpha01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     AMC79_PD00560 (groEL-3)
Messenger RNA biogenesis [BR:rpha03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AMC79_PD00560 (groEL-3)
Chaperones and folding catalysts [BR:rpha03110]
 Heat shock proteins
  HSP60 / Chaperonin
   AMC79_PD00560 (groEL-3)
Mitochondrial biogenesis [BR:rpha03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    AMC79_PD00560 (groEL-3)
Exosome [BR:rpha04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AMC79_PD00560 (groEL-3)
  Exosomal proteins of other body fluids (saliva and urine)
   AMC79_PD00560 (groEL-3)
  Exosomal proteins of breast cancer cells
   AMC79_PD00560 (groEL-3)
  Exosomal proteins of colorectal cancer cells
   AMC79_PD00560 (groEL-3)
  Exosomal proteins of bladder cancer cells
   AMC79_PD00560 (groEL-3)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: ANM01728
Position
pRphaN261d:601166..602794
AA seq 542 aa
MAAKEVKFNVEAREKLLRGVDILANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIVREGAKAVTSGMNPMDLKRGI
DLAVAAIVAELKANARNISNNSEIAQVGTISANGDAEIGRFLAEAMEKVGNDGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNADKMRVEFEDPYILIHEKKLSNLQSMLPILEAV
VQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAVLTAGTV
ISEDLGIKLESVTLDMLGRAKKVSVEKENTTIVDGSGAKSDIEGRIAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALL
RAVKALENVQTANSDQRVGVDIVRRALEAPARQIAENAGAEGSVVVGKLREKTEFSYGWN
AQTGEFGDLYAQGVIDPAKVVRTALQDAASIAGLLVTTEAMVAEKPKKDAAPPLPPGAGM
DF
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggctgctaaagaagtcaaattcaacgtcgaagcccgcgagaagctgttgcgcggcgtc
gacatcctggccaacgccgtcaaggtgacccttggcccgaaaggccgcaacgtcgtgatc
gacaaatccttcggcgcgccgcgcatcaccaaggacggcgtttcggttgccaaggaaatc
gaactcgaagacaagttcgaaaacatgggcgcccagatggtccgcgaagtcgcttcgaag
accagtgacatcgccggcgacggcaccacgaccgcgacggttctcgcccaggcgatcgtc
agggagggcgccaaagccgttacctcaggcatgaacccgatggacctgaagcgcggcatc
gatctcgccgtcgccgccatcgtcgcggaactgaaggccaacgcccgtaatatttccaac
aattccgagatcgcccaggtcggcacgatctccgccaatggcgatgctgaaatcggccgc
ttcctggcggaggcgatggaaaaggtcgggaatgacggcgtcatcacggttgaagaagcc
aagaccgccgaaaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcgggtacctc
agcccctatttcgtcaccaatgccgacaagatgcgggtcgagttcgaggatccctatatc
ctgatccacgagaaaaagctctcgaacctgcagtcgatgctcccgatcctcgaggctgtc
gtccaatcaggcaagccgctgctcatcatcgctgaagacgtcgaaggcgaagcccttgca
acgctcgtcgtcaacaagctgcgcggcgggctgaagattgctgccgtcaaggctcctggc
ttcggcgaccgccgcaaggccatgctcgaagacatcgccgtgctcaccgccggcaccgtc
atctccgaagacctcggcatcaagctcgagagcgtcacgctcgacatgctcggtcgggcg
aagaaagtgtcggttgagaaggagaacaccacgatcgtcgacggttcgggcgccaagtcc
gacatcgaaggccgtatcgcccagatcaaggcccaaatcgaagaaaccacctccgactac
gatcgcgagaagctgcaggaacgtcttgccaagctcgccggcggcgttgccgtcatccgc
gtcggcggctcgacggaagtcgaagtgaaggaaaagaaggaccgcgtcgacgacgcgctt
cacgccacccgcgcggcggtcgaggaaggcatcctgccaggcggcggcgtggcgctgctg
cgcgccgtcaaggcgcttgaaaatgtgcagaccgccaattccgaccagcgcgtcggcgtc
gatatcgttcgccgcgcacttgaggcgccagcgcgccagatcgcggagaacgccggcgcg
gaaggctcggtggtcgtcggcaagctgcgtgaaaagaccgagttctcctatggctggaac
gcccagacgggcgaatttggcgacctctatgcgcagggcgtcatcgatccggccaaggtt
gttcgcaccgcgcttcaggatgcggcctccatcgccggtcttctcgtcacgacggaagcc
atggtcgccgagaagccgaagaaggatgccgctccgccattgccccccggtgccggcatg
gatttctga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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