KEGG   Rickettsia peacockii: RPR_02190
Entry
RPR_02190         CDS       T00907                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
rpk  Rickettsia peacockii
Pathway
rpk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rpk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RPR_02190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rpk03019]
    RPR_02190
   03009 Ribosome biogenesis [BR:rpk03009]
    RPR_02190
Enzymes [BR:rpk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     RPR_02190
Messenger RNA biogenesis [BR:rpk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     RPR_02190
Ribosome biogenesis [BR:rpk03009]
 Prokaryotic type
  rRNA processing factors
   RPR_02190
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: ACR47285
UniProt: C4K134
Position
364470..366542
AA seq 690 aa
MNKKIIIDANFPSETRVVLLGQSNNIEDIEFQTTVRQQNKGNIYLAKVTRIEPSLQAVFI
EYGMDKSGFLPFSEIHPNYYNLPTSERNFPVNAFPEIALSNITVEDDKEKPAAIYDSLVD
SEEIDLKTIEDLVESRFQSELNLEAADDIEMIQSGTPESNIPQYKQYKVQEVIRKNQILL
VQVTKEERGNKCAAFTTYISLAGKYCVLMPNKGSQNGISRKISNGEERKRLKDILNKIVS
GDKNAYSVIVRTAGRGSSTLDLKKDYNYLARLWNKIRKSTIKFPAPCFIHEEDSIIRKTI
RDMCDHNVKEVVIQGQEGYEDASKFMQDLLPSELVKLKEHKSKTPIFTKFQVEEQLVKLY
QPVVTLPSGGYMVINPTEALIAIDVNSGKSTSEQNIEETALKTNLEAAKEVAKQVKLRDL
SGLIVVDFIDMSEAKNRKIIERSFKEFLSRDRARIQTGNISQFGLLEFSRQRLRSSFLET
NSAICSHCNGKGVIRASDANAMLILRTIENEIFEERIDVINVFTNIVSVIYLLNNKRAEI
KFIEEKYNIKLNFYSDPNATSDSYSIEKVKLFKKNNNNFNSVKPVIQNHNADYTEEELKK
EQLRKNKHKWKTANNSNNVANEVKDKSLEAEESVEQTVSVVEEVKVVESNAGLEEAQAAP
KKTKRRYRNKTSNKKCPSNTVEDTEKNAES
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgaataaaaagattataattgatgctaattttccaagcgaaacaagagtagttttatta
ggacaaagcaacaatatagaagatattgaatttcaaacaaccgtaagacaacaaaataaa
ggtaacatttatttagcaaaagttacaagaatagaaccgtcgctacaagctgtttttata
gagtacggaatggataaaagcggttttttaccgtttagtgaaatccatcctaactattac
aatttgcctacctcggagagaaattttccggttaatgcttttcctgaaatagctctttca
aatattacggttgaggatgataaagagaaaccggctgctatatatgattctttggttgat
agtgaagaaattgacctaaaaaccatagaagatttagtagagagtagattccagtcagaa
cttaatttagaagcggctgatgatattgaaatgattcaaagcggtacccctgagtcaaat
attccgcaatataaacaatataaagttcaagaagtaataagaaaaaaccaaatattatta
gtgcaggttactaaggaagaacgaggaaataagtgcgccgcttttactacttatatatcc
ttggctggtaaatattgtgttttaatgcctaataaaggttcgcaaaacggtatatcgcgt
aaaatatcaaacggggaagaaagaaaaagactgaaagatattttaaataaaatagtaagc
ggtgacaaaaatgcttatagcgtcattgttagaaccgcaggtagaggaagtagcacctta
gatttaaagaaagactataattatttagcaaggttatggaataaaattcgtaaaagtact
attaaatttccggctccgtgttttattcatgaggaagatagtataatacgtaaaaccata
cgtgatatgtgcgatcacaatgttaaagaagtggtaattcaaggacaagagggttatgaa
gacgcttcaaaatttatgcaggatttattaccttcagagcttgtaaagctgaaagagcat
aaaagtaaaactcctatatttactaagtttcaagtagaagagcaattagttaaattatat
cagcctgtagtgacgttaccttcaggaggatatatggttattaatcctacggaagctctt
attgcaattgatgtaaattccggtaaatcaacttctgaacaaaatattgaagaaacggca
ctaaaaactaatttagaagcagccaaagaagtagcaaagcaagtaaagcttagagatcta
tcaggtttgatagttgttgattttatagacatgagcgaagctaagaatcgtaaaattatt
gaacgatcctttaaagagtttttaagtcgtgatcgtgctcgtatacaaaccggtaatatt
agtcagtttggactacttgaattctcaaggcagagattacgttcttctttcttagaaact
aattcggcaatttgttctcattgtaacggtaaaggagtcattagagcaagtgacgctaat
gctatgttaattttacgtactatagagaatgaaatttttgaagaaagaattgatgtaata
aatgtttttaccaatatcgtttcagttatttatctacttaataataaacgtgctgagata
aaatttattgaagaaaaatataatataaagcttaatttttattccgatcctaatgctaca
tcagatagttattcgattgaaaaagtgaagctgttcaagaaaaataacaataattttaat
tctgttaagccggtaattcagaatcataatgccgattatactgaagaagagctgaaaaaa
gaacagttacgcaaaaataaacataaatggaaaacagctaataatagtaataatgttgct
aatgaagtaaaagataagagtttagaggcagaagaatcggtggagcaaaccgtaagcgtt
gtggaagaggtgaaagttgtagaaagtaatgccggcttagaagaagcacaagctgctcca
aaaaagacaaaacgtagatatcgtaataaaacatcaaataagaaatgtccttctaatacc
gtcgaagatacggaaaagaatgcagagtcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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