KEGG   Candidatus Rhodoluna planktonica: A4Z71_05555
Entry
A4Z71_05555       CDS       T04564                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
rpla  Candidatus Rhodoluna planktonica
Pathway
rpla03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rpla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    A4Z71_05555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpla03400]
    A4Z71_05555
Enzymes [BR:rpla01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     A4Z71_05555
DNA repair and recombination proteins [BR:rpla03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     A4Z71_05555
SSDB
Motif
Pfam: Exo_endo_phos AC_1 Exo_endo_phos_2
Other DBs
NCBI-ProteinID: AOY56416
UniProt: A0A1D9E038
Position
1116653..1117477
AA seq 274 aa
MPIQIATINVNGVRAAFRKGMVDWLNANSGIEILALQEVRASDADLDDLFAQHGGLAKDG
GQWHVLHDVASAKGRAGVAIVSKIPAIAVRTELGAPDFDSAGRWLEADFEIAGKTLTVIS
TYVHSGEADTPKQVEKYKFLEAMRERMAQLISTTDYVLVTGDLNVGHTELDIKNWKGNLK
NAGFLPEERAYFDDFMHKQGWVDIGRASHPGEPGPYTWWSFRGQAFDTDAGWRIDYHLAT
PKLAAVASNYRVHRAASYDTRFTDHSPVSVSYAL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgccaattcaaattgccaccatcaacgtcaatggcgttcgcgccgccttcagaaaaggc
atggtcgattggctaaacgccaattctggaatcgaaattctggcgctgcaggaagtgcgc
gctagcgacgctgatctagacgatctttttgcccagcacggcggtctggcaaaagacggt
ggccaatggcatgtgctgcacgacgtggccagcgccaaaggtcgagccggggttgcgatt
gtcagcaaaataccggcgattgcggttcgcaccgaacttggcgcgccagactttgactca
gccggtcgctggttagaggccgattttgaaattgccggaaaaacgctcactgtcatcagc
acctatgtgcactccggcgaggccgatacgccaaaacaggttgagaaatacaaattttta
gaagccatgcgtgagcggatggcgcaactgatctcgaccacagactatgtcttagtcacc
ggtgacctcaacgtaggtcacactgaactagacataaaaaattggaagggcaacctcaag
aacgccggtttcttacccgaagagcgagcctactttgatgacttcatgcacaagcagggt
tgggttgacattggccgtgccagccacccgggcgaacctggcccctacacctggtggtct
tttagaggtcaggccttcgataccgatgcgggctggagaattgactatcacctagccact
ccaaagttagccgctgtagctagcaactaccgggttcatcgagcagcgagctatgacact
cgctttaccgaccactcgcccgtgagcgtttcctacgccctctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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