KEGG   Raoultella planticola: B1209_18630
Entry
B1209_18630       CDS       T05298                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
rpln  Raoultella planticola
Pathway
rpln03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rpln00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B1209_18630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rpln03019]
    B1209_18630
Enzymes [BR:rpln01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     B1209_18630
Messenger RNA biogenesis [BR:rpln03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     B1209_18630
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UvrD-helicase P-loop_SecA AAA_22
Other DBs
NCBI-ProteinID: AUV54472
UniProt: A0A2X2DZP3
Position
complement(3863962..3865362)
AA seq 466 aa
MSFDSLGLNPDILRAVAEQGYLEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QHLIQKEPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRSGVDVLVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLHDI
ERLLKKEIPRIAVDGYAPDPSIRAEPIQNGRQQRSGGGGRGQSQGRSGQGQGRNAQGQGR
SQQSAPRRNDGEAPKAGAKPSRRIGEAKPAGEQQRRRRPRKPAAAE
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtcttttgattcccttggcctgaaccctgatatcctgcgcgctgtcgccgagcagggt
taccttgagccaaccccaattcagcagcaggctatccctgcggtgttgcagggacgcgat
ctgatggccagcgcccagaccggcaccggcaaaacggcaggctttaccctgccgctcctg
cagcatctgattcagaaagagccgcatgctaaaggccgtcgtccggtgcgcgcgctgatc
ctcacgccaacgcgtgaactggcggcacaaatcggcgaaaacgttcgcgattacagcaaa
tacctgaatattcgctcgctggtggtcttcggcggggtgagcattaacccgcagatgatg
aagctgcgcagcggcgtcgatgttctggtagccacccctgggcgcctgctggatcttgaa
catcagaatgccgtcagcctggacaaggttgaaatcctggtgcttgatgaagccgaccgc
atgctggatatgggctttattcatgatattcgccgcgtgctggcgaagcttccggcgaag
cgccagaacctgctgttctccgcgaccttctccgacgacattaaagcgctggcggaaaag
ctgctgcataacccgctggaaatcgaagtggctcgccgcaataccgcttccgagcaggtg
acgcaacacgtccatttcgttgataagaaacgtaagcgggaactgctgtcgcagatgatc
ggtgaaggtaactggcagcaggtgctggtctttacccgcaccaaacatggcgccaaccac
ctggccgagcagctgaataaagacggcatccgcagcgcggctatccatggcaacaagagc
cagggggcgcgtacccgggcattagccgactttaaatccggcggtattcgcgtgctggtg
gcgacggatatcgccgcgcgtggtctggatatcgaagaactgccgcacgtcgtcaactac
gagctgcctaacgtaccggaagattacgttcaccggatcggccgtaccggtcgcgcagcc
gccaccggtgaagcgctgtcgctggtctgcgtggacgagcataaactgctgcatgatatc
gaacgtctgctgaaaaaagagattccacgcatcgccgtcgatggctatgcgccggatccg
tctatcagagcggagccgattcaaaacggtcgtcagcagcgtagcggtggcggcggtcgc
ggccaaagccagggccgcagcggtcagggacaaggacgtaacgcccaggggcaggggcgc
agccagcagtcggcgccgcggcgtaacgacggcgaagcgccgaaagccggggcaaagcct
tcacgccgtatcggtgaggcgaaaccggccggcgagcaacagcgccgccgtcgtccgcgt
aaacctgcggccgctgagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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