KEGG   Raoultella planticola: B1209_25655
Entry
B1209_25655       CDS       T05298                                 
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
rpln  Raoultella planticola
Pathway
rpln00730  Thiamine metabolism
rpln01100  Metabolic pathways
rpln01240  Biosynthesis of cofactors
Module
rpln_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:rpln00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    B1209_25655
Enzymes [BR:rpln01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     B1209_25655
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated
Other DBs
NCBI-ProteinID: AUV55614
Position
5314298..5316193
AA seq 631 aa
MSASKPTRREQRERAQHFIDTLEGTAFPRSRRIYVQGAQDNIRVPMREIQLSPTPIGGDK
INPQYEENEAIPVYDTSGPYGDPDIAIDVRQGLAKLRQPWIDARHDCEPLRERSSLYTKA
RLADEELDALRFSGSLAPKRAKSGKCVTQLHYARQGIVTPEMTFIAIRENMGRERIRSEV
LRHQHPGEGFGARLPENISAEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI
GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL
EKVNGIAENLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAGRLTGIVSRGGSIMA
KWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELT
KIAWEYDVQVMIEGPGHVPMQMIRRNMTEELTHCHEAPFYTLGPLTTDIAPGYDHFTSGI
GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM
SKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVRDY
AARQHIAAGMADKSQDFRALGGEIYLRKEQA
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgtccgcaagcaaaccgacccgccgggaacagcgcgaacgcgcgcaacactttattgac
actctggaaggcaccgcctttccccgctcacgacgcatctatgttcagggcgcgcaggat
aatattcgcgtaccgatgcgcgaaatccagctcagccccacgccgatcggcggcgacaaa
atcaacccgcagtatgaagagaacgaagccataccggtgtatgacacctccggcccctat
ggcgatcctgatatcgccatcgacgtccggcagggactggcgaagctgcgtcagccgtgg
attgacgctcgccacgattgcgagccgctacgcgaacgcagctccctctacaccaaagcg
cgtctggccgatgaggagctggatgcgctgcgctttagcggctcgctggcacccaaacgc
gcaaaatcaggcaaatgcgtcacgcaactccactacgcacgtcagggcatcgtcacgccg
gagatgacgtttatcgccatccgggaaaatatgggccgcgagcgcattcgcagcgaggtg
ctgcgccaccagcatccgggcgaaggttttggcgcccgcctgccggagaatatctccgcg
gagttcgtccgtgatgaagtcgccgccggtcgcgcaatcattccagcaaatatcaaccat
cctgagtcggaaccgatgattatcggccgcaattttctggtgaaggtcaacgccaacatc
ggtaactcggcggtcacctcctccatcgaagaggaggtagaaaaactggtgtggtcgaca
cgctggggcgctgacacggtcatggatttgtccaccggccgttatattcacgaaacccgc
gagtggatcctgcgcaacagcccggtccctatcggtaccgtccccatctaccaggcgctg
gagaaggtgaacggtatcgccgaaaacctcacctgggaagcctttcgcgacaccctgctg
gagcaggcagaacaaggcgttgactatttcaccatccatgccggcgtcctgctgcgctac
gtgccgatgaccgccggacggctgaccggcatcgtctcccgcggcgggtcgatcatggcg
aagtggtgcctgtcccatcatcaggaaaacttcctctaccagcattttcgcgaaatctgc
gaaatctgcgccgcctatgatgtctcgctctccttaggcgatggcctgcgcccgggttcc
attcaggatgccaacgacgaagcgcagttcgccgagctgcacaccctgggggagctgaca
aaaatcgcctgggaatatgatgtgcaggtcatgatcgaaggtccaggccatgtacccatg
cagatgatccgccgcaatatgactgaagagctgacccactgccacgaagcgccgttctac
acgcttgggccattaaccaccgatatcgctcccggctatgaccacttcacctccggtatc
ggcgcggcgatgatcggctggttcggctgcgccatgctctgctacgtcacgccgaaagag
catctcggcctgcccaataaagaggacgtgaagcaaggattgatcacctacaaaatcgcc
gcccatgccgctgacctcgccaaagggcaccccggagcgcagatccgcgacaacgccatg
tccaaagcgcgatttgaattccgctgggaagaccagtttaacctcgcgctcgacccgttc
accgcccgcgcctatcacgatgaaacgctgccgcaggagtccggcaaagtcgcccacttc
tgctccatgtgcgggcctaaattctgttcaatgaaaatcacccaggaggtccgcgattat
gccgcccggcagcatatcgcagccggtatggccgataaatcccaggatttccgcgctctt
ggcggtgagatctatttacgtaaggagcaagcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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