KEGG   Raoultella planticola: B1209_26730
Entry
B1209_26730       CDS       T05298                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rpln  Raoultella planticola
Pathway
rpln03030  DNA replication
rpln03410  Base excision repair
rpln03420  Nucleotide excision repair
rpln03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rpln00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B1209_26730
   03410 Base excision repair
    B1209_26730
   03420 Nucleotide excision repair
    B1209_26730
   03440 Homologous recombination
    B1209_26730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rpln03032]
    B1209_26730
   03400 DNA repair and recombination proteins [BR:rpln03400]
    B1209_26730
Enzymes [BR:rpln01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B1209_26730
DNA replication proteins [BR:rpln03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     B1209_26730
DNA repair and recombination proteins [BR:rpln03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     B1209_26730
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B1209_26730
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH HHH_5 XPG_N
Other DBs
NCBI-ProteinID: AUV55776
UniProt: A0A443VIU1
Position
complement(5530951..5533737)
AA seq 928 aa
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAVV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHTMVKAMGLPLMAVPGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPEEVVTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELDLSCEELHVLPPAADDLLALFKKYEFKRWITDVESGKWMQSK
GVKPAVKPTEAVAVAEEEAEVVATLSAENYVTILDEQTLIEWIDKLKQAPLFAFDTETDS
LDNISANMVGLSFAIEPGVAAYVPVAHDYLDAPDQIARERVLTLLKPLLEDENLLKVGQN
LKYDRGILANYDIELRGIAFDTMLESYILDSVAGRHDMDSLADRWLKHKTISFEEIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPKLQQHEGPLNIFKNIEMPLVPVLSRV
ERNGVNIDPAVLHAHSQEIAKRLIELEQKAYEIAGEEFNLSSPKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPPDYLIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLPLESVSSEQRRSAKAINFGLIYGMSAFGLARQLNIP
RKEAQKYMDLYFERYPGVLDYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAGAE
RAAINAPMQGTAADIIKRAMIAVDEWLLTEKPRVRMIMQVHDELVFEVHKDDLDAVAKKV
HELMENSTTLAVPLLVEVGSGENWDQAH
NT seq 2787 nt   +upstreamnt  +downstreamnt
atggttcagatcccagaaaacccacttatcctcgttgacggctcctcttacctctaccgg
gcgtatcacgctttcccgccgctgactaacagcgccggagaaccgacaggcgctatgtat
ggcgtgctgaatatgctgcgaagcctgatcctccagtatcaacccacgcatgccgtggtg
gtatttgatgccaaagggaaaactttccgtgacgaactgtttgagcattacaaatcccat
cgtccgccgatgccggacgatctgcgggcgcagatcgaaccgctgcataccatggtgaag
gcgatggggctgccgctgatggctgtgcctggcgtcgaagcggacgatgtgatcggaact
ctggcgcgcgaagcagaaaaagcgggccgcccggtgctcatcagtaccggtgataaagat
atggcgcagctggtcacgccgggaattaccctgattaataccatgaccaataccattctt
ggcccggaagaagtggtgacgaagtacggcgttccgccagagctgattattgacttcctg
gcgctgatgggcgactcctccgataacattcctggcgtacccggcgtgggcgagaaaacg
gctcaggcgctgctgcaggggttgggagggctggatacgttgtacgctgagccagaaaaa
attgccggtttgaccttccgtggtgccaaaacgatggcggcgaagctggaacagaataaa
gaggtggcctacctctcgtatcagctggccacgattaaaaccgacgtcgagctggatctg
agctgtgaagagctgcacgtgctgccgccggcggcggatgatctgttggctctgttcaaa
aagtatgaatttaagcgctggatcaccgatgttgaatccggcaaatggatgcagtcaaaa
ggcgtgaagccagccgtaaaaccgacagaagcggtggcagtagcggaagaagaagccgag
gtggtggcgacgctgtctgcggaaaactacgtcactattcttgatgagcagacgctgatc
gaatggatcgacaagctgaaacaagcgccgctgtttgcgtttgatacggaaacggacagc
ctggataatatttctgccaatatggtgggtctgtcgtttgccatcgagcccggcgttgct
gcctatgtaccggttgcgcatgattatctcgatgcaccggatcagatcgccagagaacgc
gtactgacgttgctgaaacccctgctggaagacgagaatctgctgaaggtcgggcaaaac
ctgaaatatgaccgcggaattctggcgaactatgacattgagttacgcggtatcgctttt
gacaccatgctggaatcctacattcttgatagcgtggcgggccgtcatgatatggacagc
cttgccgaccgctggctgaagcataaaacgattagctttgaagagattgcgggtaaaggt
aaaaatcagctcacctttaaccagatcgcgctggaagaagccggccgctacgcggcggaa
gatgccgatgtcaccctgcagctgcacctgaagatgtggccgaagctgcagcagcatgaa
ggtccgctgaatatttttaaaaatattgagatgccgctggtaccggtgctctcccgcgta
gaacgtaacggggtcaacattgatccggccgtactgcatgcccattcacaggagattgcc
aaacgcctgatcgagctggagcagaaagcctacgagatcgcgggtgaagagttcaatctc
tcttcacccaagcagcttcaaactattttgtttgaaaaacaaggtattaaaccactgaag
aaaacaccgggcggcgcgccttcaacttccgaggaagtgctcgaagaactggcgctggat
tatccgttaccgaaagttattctggaatatcgcggactggcgaagctgaagtcgacatat
accgacaagctgccgctgatgattaaccctaaaaccggccgcgtgcatacctcttatcat
caggcggtaacggcgacggggcgtctctcctccaccgatcctaacctgcagaacattccg
gtgcgtaacgaagaggggcgtcgtattcgtcaggcatttatcgcgccgccggattacctc
atcgtctctgccgactattcacaaattgagttgcgcattatggcgcatctgtcgcgtgac
aaaggcctgctgaccgcctttgcggaaggtaaagatatccaccgcgcaacggcggcagag
gtctttggcctgccgctggagagcgtaagcagcgagcagcgtcgaagtgccaaggcgatt
aactttggtctgatttatggcatgagcgcatttggccttgcccggcagctcaatattccg
cgtaaagaggcgcagaaatatatggacctctattttgagcgctatcctggcgtcctcgat
tacatggagcgtacccgggcacaggcaaaagagcagggctatgtcgaaacgctggatggc
cgtcgcctctaccttccggacatcaaatccagcaacggcgcccgtcgtgccggcgccgaa
cgtgcggcgatcaacgccccgatgcaggggacggcggctgacattatcaagcgcgcgatg
atcgccgttgatgaatggctgctgaccgagaagccgcgggtgcggatgatcatgcaggtg
cacgatgaactggtctttgaagtgcacaaagatgaccttgatgccgtggcgaaaaaggtg
cacgaactgatggaaaatagcaccacgctggcggtaccgctgctggtggaagtgggaagc
ggagaaaactgggatcaagcgcactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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