KEGG   Pararhodospirillum photometricum: RSPPHO_00830
Entry
RSPPHO_00830      CDS       T01851                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
rpm  Pararhodospirillum photometricum
Brite
KEGG Orthology (KO) [BR:rpm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rpm03032]
    RSPPHO_00830
   03400 DNA repair and recombination proteins [BR:rpm03400]
    RSPPHO_00830
Enzymes [BR:rpm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RSPPHO_00830
DNA replication proteins [BR:rpm03032]
 Prokaryotic type
  DNA Topoisomerases
   RSPPHO_00830
DNA repair and recombination proteins [BR:rpm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RSPPHO_00830
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert Toprim_4
Other DBs
NCBI-ProteinID: CCG07456
UniProt: H6SQZ1
Position
1045064..1047472
AA seq 802 aa
MTQQAYTSESINVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALAGYCDRT
EVVLNGDGSITVRDNGRGIPVDIHKGEGVSAAEVVMTQLHAGGKFNQNAYKVSGGLHGVG
VSVVNALSDWLDLYIWRDGKEHYLRFEHGAAVAPLAVVGDSQGRSGTQITFFASPSIFTH
TDYDYATLEHRLRELAFLNSGVRLVLMDYRSAEPRVAEFHYEGGIEAFVRYLDKSKKVLH
ASPVTASGERDGITVDLSLEWTDSYHESVLCFTNNIPQKDGGTHMAGFRAALTRTLNTYA
QNSGLLKKEKVALTGDDMREGLTCVLSVKVPDPKFSSQTKEKLVSSEVRPVVEAVVSERL
DQWLEEHPQDARLIVGKVIEAAAAREAARRARDLTRRKGALDMASLPGKLADCQNRDPAH
SELFIVEGDSAGGSAKQGRDRAFQAILPLRGKILNVERARFDKMLSSAEIGTLIAALGTG
IGKDDFAIEKTRYHKIIIMTDADVDGSHIRTLLLTFFFRQMPEIVEKGYLYIAQPPLYRA
RRGSSEQYLKDDREMEDYLISAGLEDTVLILGDGTQVGAADLRDLVERSRLARSAVLGMG
RKVPWDLLEQAAIAGAFSPEILADPVRAQAAADQVAARVDALADSLERGWRGSLADGGGL
SLRRTLRGVEEVHTIDGPMVHSTEARRLGTMAGALRDIFGQPATLRSKEGDTRIPGPVAL
VNAIMTAGRRGISIQRYKGLGEMNPEQLWETTLDPNARRLLQVKVAQADQAEDVFATLMG
DVVEPRREFIQDNALNVKNLDV
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgacacaacaggcctatacctctgaatccatcaatgttctcaagggcttggaggcggtg
cgcaagcgcccgggcatgtacatcggtgataccgacgacgggtcgggcctgcaccacatg
gtctacgaagtcgttgataacgccattgacgaggcgctggccggctactgcgaccgcacc
gaggtggtcttaaacggcgatggctccatcacggtgcgcgacaacgggcgcggcattccc
gtcgatatccacaagggcgaaggggtgagcgccgccgaagtggtgatgactcaattgcac
gccggcggcaagttcaaccagaacgcctataaagtctcgggcggcctgcacggggtcggc
gtctcggtcgtcaacgcgctgtcggactggctcgacctgtacatctggcgcgacggcaag
gagcactacctgcgcttcgagcacggcgccgccgtggcccccttggccgtggttggcgac
agccagggccggagcggcacccagatcaccttttttgcctccccgtcgatcttcacccat
accgactacgactacgccaccttggagcaccgcctgcgcgagctggccttcctgaactcc
ggcgtccgactcgttctgatggattaccggagcgccgagcctcgcgtcgccgaattccac
tacgagggcggcatcgaggcctttgtccgctacctcgacaagtccaagaaggtgctgcac
gcctcgccggtcaccgcctcgggcgaacgcgacggcatcaccgtggatctgtcgctggaa
tggaccgacagctatcacgagtcggtgctgtgctttaccaacaacatcccgcaaaaggac
ggcggcacccacatggcgggctttcgcgccgctctgacccgcaccctcaacacctatgcc
caaaacagcggcctgctcaaaaaggaaaaggtcgccctgaccggcgatgacatgcgcgaa
ggcctgacctgcgtgctgtcggtcaaggttcccgaccccaagttctccagccagaccaag
gaaaagctggtctcgagcgaggtgcgcccggtcgtcgaggccgtggtgtccgaacggctc
gaccagtggctggaagagcacccgcaagacgcccgcctgatcgttggcaaggtcattgag
gccgccgccgcccgcgaggccgcccggcgagcccgcgacctgacccggcgcaaaggggcg
ctcgacatggcgagcctgcccggcaagctggccgattgccaaaaccgggatccggcccac
tccgaactgttcatcgtggagggtgactcggccggtggctcggccaaacagggccgcgac
cgcgcctttcaggccattttgcccctgcgcggcaaaatcctgaacgtcgagcgggcccgc
ttcgacaagatgctgtcgtcggccgaaatcggcaccttgattgccgccctgggcacgggc
atcggcaaggatgattttgcgatcgagaagacccgctaccacaaaatcatcatcatgacc
gacgccgacgtggacgggagccacatccgcaccttgttgctgactttcttcttccggcag
atgccggagatcgtggaaaagggctacctgtacatcgcccagccgccgctataccgggcc
cggcgcggctcgtccgagcagtatctcaaggacgaccgcgagatggaggactacctcatc
agcgccggcctggaggataccgtcttgatcctgggcgacggcacccaggtcggcgccgcc
gatctgcgcgatctggtggaacgctcgcgcctcgcccgctccgccgtgttgggcatgggc
cgcaaggtgccctgggacctcctggaacaagcggccatcgccggcgccttctcgcccgag
atcctggccgatcccgttcgggcccaggccgccgccgatcaggtggccgcccgggtcgat
gccctggccgattcgctggaacggggctggcggggcagcctcgccgacggcggcggcctt
tccctgcgccgcaccctgcgcggcgtcgaggaggtccacaccatcgacggtccgatggtc
cacagcaccgaggcgcggcgcctgggcaccatggccggcgccctgcgcgacatcttcggc
cagccggccaccttgcgctcgaaggaaggcgacacccgcatccccggccccgtcgccctg
gtcaacgccatcatgaccgccggtcggcgcggcatctccatccagcgctacaagggcctg
ggcgagatgaacccggaacagctgtgggaaaccaccttggaccccaacgcccgccgcctg
ctccaggtcaaggtcgcccaggccgatcaggccgaggatgtgtttgccaccttgatgggc
gacgtggtcgagccgcgccgtgagttcattcaggacaatgcgctgaacgtgaagaacttg
gacgtttga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (59)   
   KEGG ORTHOLOGY (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (73)   

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