KEGG   Rickettsia prowazekii NMRC Madrid E: H374_5420
Entry
H374_5420         CDS       T02544                                 
Name
(GenBank) Methyltransferase
  KO
K03628  transcription termination factor Rho
Organism
rpn  Rickettsia prowazekii NMRC Madrid E
Pathway
rpn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rpn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H374_5420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rpn03021]
    H374_5420
   03019 Messenger RNA biogenesis [BR:rpn03019]
    H374_5420
Transcription machinery [BR:rpn03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     H374_5420
Messenger RNA biogenesis [BR:rpn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     H374_5420
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N ATPase_2 AAA_22 AAA_25 OB_RNB Spore_III_AA NACHT AAA Mor
Other DBs
NCBI-GeneID: 15150322
NCBI-ProteinID: AGJ01827
Position
645572..646945
AA seq 457 aa
MNTTNKQLTEELNNTESNNDHNDFAENNIINLKQLKRKLPEELQVQAEELKIENISSLLK
QELVFAILKKSVEQGGLIVGEGVLEVLPDGFGFLRSPEVNYLAGPDDIYISPSQIRRFGL
RTGDTVEGQIRAPKAGERYFALLKVNRVNFEDPAKAYHRVHFDNLTPLYPDEKLGLELEN
NSKDSKDFSTRVIELVAPMGKGQRALIVAPPRTGKTVLLQNIAHAITTNNPEVFLIVLLI
DERPEEVTDMQRSVRGEVVSSTFDEPASRHVQLAEMVIEKAKRLVEHKKDVVILVDAITR
LARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIENGGSLTIIGTALIETGSRMDE
VIFEEFKGTGNSEIVLDRKIADKRIYPAIDITRSGTRKEDLLVDKIILNKMWVLRRIIDP
MGSSEAIEFLLKKLENTKTNCAFFEMMKSPERPRNGL
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgaacacaactaataaacaattgacagaagaactgaataatactgaatccaataacgat
cataatgattttgcagagaataatattattaatttaaaacaattaaaacgtaaattacct
gaagaattacaagttcaagcagaagaattaaaaattgaaaatattagttcattacttaaa
caagaattagtttttgcaattttaaaaaaatctgtagagcagggaggtttaatagtaggc
gagggcgtacttgaagtattacctgatggatttggttttttacgttcgcctgaagtaaat
tatttagcaggtcctgatgatatttacatctctcctagtcaaattcgtcgttttgggctt
cgtaccggtgatacggtagaaggtcagattagagcaccaaaagccggagaacgttatttt
gctttactgaaagtaaatagagtaaattttgaagaccctgctaaggcttatcatcgtgta
cattttgataatttaactccattatatcctgatgaaaaattaggattagaactagaaaat
aatagtaaagatagtaaggattttagtacacgggttattgagcttgtggctcctatgggt
aaagggcagcgtgcattaatagtagcgccacctcgtactggtaaaaccgtattattacaa
aatatagcacatgcaattacaacaaataatccagaagtatttttaatagtattattaata
gatgaaaggcctgaagaagtaacagatatgcaacgttccgtgcgtggagaggttgttagc
tccactttcgatgaacctgcaagtagacatgtgcagcttgcagaaatggtgattgagaaa
gcaaaacgtctagtagaacataaaaaagatgtggtaattttagtagatgcgataacacga
cttgctcgtgcttataatacagttgtaccttcatcagggaaagtattaactggcggtgtt
gatgctaatgcactacagagaccaaaaagatttttcggagcagctagaaatattgaaaat
ggtggctcacttactataattggtacagctttaattgaaactggttctcgtatggatgag
gtaatttttgaggagtttaaaggtacaggtaattctgaaatagttttagatcgtaagatt
gcagataagcgtatttatccggcaattgatataacaagatcaggaactagaaaagaagat
ttattagtagataagataattttaaataaaatgtgggttcttcgtcgtattatcgatcca
atgggtagcagtgaagcaatagagtttttgctcaaaaaacttgaaaatactaaaactaac
tgtgcgttttttgagatgatgaagagtcctgaacgccctagaaacggtttatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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