KEGG   Rodentibacter pneumotropicus: NCTC8284_03470
Entry
NCTC8284_03470    CDS       T05800                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
rpne  Rodentibacter pneumotropicus
Pathway
rpne03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rpne00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCTC8284_03470 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rpne03019]
    NCTC8284_03470 (rhlB)
Enzymes [BR:rpne01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     NCTC8284_03470 (rhlB)
Messenger RNA biogenesis [BR:rpne03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     NCTC8284_03470 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 AAA_22 AAA_19
Other DBs
NCBI-ProteinID: VEH68240
UniProt: A0A3S4XVS0
Position
1:2107290..2108540
AA seq 416 aa
MQQDYLSQQRFADFPLHPIVLKALQTKGFEYCTPIQALSLPISLQGKDIAGQAQTGTGKT
IAFLTTTFHHLLTYKKDKTEHNQPQALILAPTRELAVQISNDAEFLAKASGLKTAIAYGG
DGYDKQLQAIERGVDILIGTTGRIIDYVKQGTIRLDQIQIVVLDEADRMFDLGFIRDIRY
LLRKCPSPQSRLTMLFSATLSYKVRELAFEDMNDPEYIEIEPEQKTGHRIKEELFYPSNQ
DKMALLLTLIEEEWPERCIVFANTKHRCEEIWRYLVADGHRAGLLTGDIAQKKRLTLLKQ
FTDGSLDILVATDVAARGLHIADVTHVFNYDLPDDREDYVHRIGRTGRAGESGISISFAC
EEYAMNLPAIEEYIGHSIPVSQYDQTSLLSLPKPFPLKPRSNNHSRVAMRSRTYRK
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgcaacaagattatttaagccaacagcgatttgctgattttcctttacaccctattgta
ttaaaagccttacaaaccaaaggctttgagtattgcacgccgattcaggctctttcattg
cctatcagcctgcaaggtaaagatattgcaggccaagctcaaaccggtacgggtaaaact
atagcctttttaacgacgaccttccaccatctgcttacctataaaaaagataaaacggag
cacaatcaaccgcaagcattgattcttgcaccaacccgtgagcttgctgttcaaattagc
aatgatgcggaatttttagcaaaagcgagcggattaaaaacagccattgcgtatggcggg
gatggctacgacaaacaattacaagctattgaacgcggagtggatattttaatcggtacg
acggggcgtattattgattatgtaaaacaaggtacgattcgtttagatcagatccaaatt
gtcgtcttggacgaagcggatcgaatgtttgatctgggtttcattcgcgatattcgttat
ttattgcgtaaatgcccttctccacaaagccgtttaactatgctgttttcggcaaccctg
tcatacaaagtacgtgaacttgctttcgaagatatgaacgatccggaatacatcgaaatt
gaacccgaacaaaaaaccggtcatcgcattaaggaggaattattttatccttccaaccaa
gacaaaatggcactattactgactttgatagaggaagaatggcctgaacgctgtattgta
tttgccaataccaaacatcgctgcgaagaaatttggcgctatttagtggcagacgggcat
cgtgcaggcttgctaaccggtgacattgcacagaaaaaacgtcttacactattaaaacaa
ttcactgatggttctttagatattcttgtcgcaaccgatgtagcggcccgaggattacat
atcgcagatgttacccatgtatttaattatgatttaccggatgatcgtgaagattatgta
caccgcatcggacgtaccggtcgtgccggtgaaagcggtatttcaattagtttcgcctgt
gaagaatacgcaatgaatttaccggctattgaggaatacattgggcattcgattcccgtc
agccaatatgatcaaacatctctattaagtttacctaaaccgtttcctttaaaaccccga
tcaaacaatcattcacgggtagcgatgagaagtcgtacttaccgaaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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