KEGG T05862: E0E05

Roseitalea porphyridii: E0E05_07175

Entry

E0E05_07175       CDS       T05862

Name

(GenBank) HU family DNA-binding protein

K03530

DNA-binding protein HU-beta

Organism

rpod Roseitalea porphyridii

Brite

KEGG Orthology (KO) [BR:rpod00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rpod03032]
    E0E05_07175
   03036 Chromosome and associated proteins [BR:rpod03036]
    E0E05_07175
   03400 DNA repair and recombination proteins [BR:rpod03400]
    E0E05_07175
DNA replication proteins [BR:rpod03032]
Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    E0E05_07175
Chromosome and associated proteins [BR:rpod03036]
Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    E0E05_07175
DNA repair and recombination proteins [BR:rpod03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      E0E05_07175

SSDB

Motif

Pfam:

Bac_DNA_binding HU-HIG DUF2267 HU-CCDC81_euk_2

Other DBs

NCBI-ProteinID:

QBK30399

UniProt:

A0A4P6V186

Position

1465439..1465714

AA seq 91 aa
MNKNELAAAVAEKAGLGKGDAASAVDAVFATITETLKSGGDVRVLGFGNFVVQQRAATTG
RNPMTGAAVDIPAKRVPKFSAGKALKDAVNG

NT seq 276 nt +upstreamnt +downstreamnt
atgaacaagaatgaactggccgcagcggtcgccgaaaaggctggcctgggcaagggcgat
gcggcatcggctgtcgacgccgtctttgcgacgatcaccgaaacattgaagtccggcggc
gatgtgcgcgtgctcggcttcggcaatttcgtcgtccagcagcgcgccgccacgaccggc
cgcaatccgatgaccggcgcggccgtggacattccggccaagcgcgtgccgaaattctcc
gccggcaaggcactcaaggacgccgtgaacggctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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