KEGG   Rickettsia parkeri: MC1_03150Help
Entry
MC1_03150         CDS       T01785                                 

Gene name
murD
Definition
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
rpp  Rickettsia parkeri
Pathway
rpp00471  D-Glutamine and D-glutamate metabolism
rpp00550  Peptidoglycan biosynthesis
rpp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rpp00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00471 D-Glutamine and D-glutamate metabolism
    MC1_03150 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    MC1_03150 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rpp01011]
    MC1_03150 (murD)
Enzymes [BR:rpp01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     MC1_03150 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:rpp01011]
 Precursor biosynthesis
  Amino acid ligase
   MC1_03150 (murD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Mur_ligase_M Mur_ligase_C Endonuc_subdom
Motif
Other DBs
NCBI-ProteinID: AFC74758
Position
556197..557699
Genome map
AA seq 500 aa AA seqDB search
MNSHTKQKIGVFGLGKTGISVYEELQNKYDVIVYDDLKANRDIFEELYSKTAIAALSDSR
WQNLDTIVLSPGIPLTHEIVNIAKSFNIPITSDIDLLFAKSKNLKFIAITGTNGKSTTTA
LISHILNSSGLDYPVAGNIGVSALQAKASKDGYVLELSSFQLDLVKTFTAKIAVLLNITP
DHLDRHQDMTCYIAAKSKIFDRMDQESYAVINIDNDYCREVFIKLQQEQRIKLIPFSVAQ
ILENGISVVDDKIRANFFDDISFELQHNSESFRQDEFQGEPAEPECIKIREHRQDLQNSL
VSSFMHYAVPFNKNLQGVHNCENIAASYAVAKIIGVEPKKILESISSFQSLPHRMQYIGS
INNISFYNDSKATNAISAVQSIKALDNIYWLAGGIPKEGGIEEIKPYFSHIKKAYFYGQA
KEIFANTAKNIVDFVICDNLEQAFDLAYKDAVGDNAEVKNILLAPSCSSYDQFKNFEERG
ELFIKLCSILSLRGLTTGSS
NT seq 1503 nt NT seq  +upstreamnt  +downstreamnt
atgaattctcatacaaaacaaaaaataggtgtttttgggcttggtaaaaccggtatatcg
gtttacgaggaattgcaaaataaatatgatgtaattgtttatgatgatttaaaagcaaat
agagatatatttgaagaattatatagtaaaaccgctatcgctgctttatctgattcaaga
tggcaaaatttagatacaattgtcttaagtcctggaattcctttaacgcatgagatagtc
aatattgcaaaaagttttaatattccaatcacttctgatatagacttattatttgcaaaa
tcaaaaaacttaaaatttatagctataaccggtacaaacggtaaaagtactactactgct
ttaataagccatatcttaaatagtagcggtttagactatccggttgccggtaatattgga
gtttctgctttgcaagctaaagcaagtaaggatggatatgtacttgaattgtcttctttt
cagctagatctagtaaaaacctttacagctaaaatagccgtgcttcttaatataactccc
gaccatttagatagacatcaggatatgacctgctatattgccgcaaaatctaagatcttt
gatcgaatggatcaagagagttatgcggtaattaatatcgataatgattattgtcgtgaa
gtctttataaaattgcagcaagagcagcgtataaagctaattcctttttcggttgctcaa
attcttgaaaacggtatttcggtagttgatgataaaattagagctaatttttttgatgat
ataagttttgaattacagcataattcagaaagttttagacaagatgaatttcaaggtgag
cctgcggagccggagtgtataaaaatacgtgagcacaggcaagacctgcaaaattcgctt
gtatcaagctttatgcattatgctgtaccttttaataaaaacctgcaaggagttcataat
tgtgagaatattgcagcaagttatgcagtagctaaaataataggagtagaacctaaaaaa
atacttgaatctataagtagttttcaaagtttacctcatagaatgcaatatatcggtagt
ataaataatataagtttttacaatgatagtaaagcgacaaatgccatatctgccgtgcaa
tcaattaaagcactcgataatatttactggcttgcgggaggaattcctaaagagggtggt
attgaggaaataaagccttatttcagtcacattaagaaagcttatttttatggtcaagct
aaagaaatatttgcaaatactgctaagaatatagtagattttgtaatatgtgataatctt
gagcaggctttcgatcttgcttataaggatgcagtaggtgataacgcggaggtaaaaaat
atcttgttagcacctagttgtagctcatatgatcagtttaaaaattttgaagagcgtggc
gagttgtttataaaattgtgtagtatcctgtcactccgtggcttgaccacggggtctagt
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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