KEGG   Rickettsia prowazekii Madrid E: RP260
Entry
RP260             CDS       T00018                                 
Symbol
RP260
Name
(GenBank) EXODEOXYRIBONUCLEASE III (xthA1)
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
rpr  Rickettsia prowazekii Madrid E
Pathway
rpr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rpr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RP260 (RP260)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpr03400]
    RP260 (RP260)
Enzymes [BR:rpr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     RP260 (RP260)
DNA repair and recombination proteins [BR:rpr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     RP260 (RP260)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: CAA14722
UniProt: Q9ZDR5
Position
319944..320729
AA seq 261 aa
MKVVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVANSLFPLEVIKNIGYEHVIYSGQ
KSYNGVAIISKFPLNNVFALELYNGDKRHIAAIVNDLEIHNFYVPAGGDIPDVEVNFKFK
HKLEYVRLMREWFTANRTKNDKIIIVGDLNIAPHEHDVWSSKQMQNVISHTDIERSLLIE
LQNSLGFIDSSRYFISLNKKCYTWWSYRNVDWKKSNRGRRLDHIWVSDNLKYALFSMHLL
SEARDWFRPSDHVPYLVTFNF
NT seq 786 nt   +upstreamnt  +downstreamnt
atgaaagtagtgacttggaatattaattcattacgtctacgtattgatttattaaggaaa
ttagcatatgaacatcagccagatattattttacttcaagaaacaaaagtagctaattca
ttatttccacttgaagttattaaaaatataggatatgaacatgtaatatattcaggtcag
aaatcatataatggtgttgctattatttcaaaatttcctttgaataatgtttttgcactg
gaattatataatggcgataaaaggcatatagcagctatagttaatgatttagagatacat
aatttttatgttccagcaggtggtgatatacctgatgtagaggtaaactttaaatttaaa
cataagctcgaatatgtaaggttaatgcgggaatggtttactgctaaccgtactaaaaat
gataaaattattattgtcggggacttaaatattgctccacatgaacatgatgtatggtct
agtaagcagatgcaaaatgttattagtcatactgatattgaacgctcgttattgatagag
ctacaaaactcgttaggttttattgatagtagtagatattttatatcacttaacaaaaaa
tgttatacttggtggagttatagaaatgtagattggaaaaaatctaataggggtagaaga
ctggatcatatttgggttagtgataatttaaaatatgcattattttctatgcatttacta
tcagaagcacgagattggtttcgtccttcggatcatgtgccatatttggtaacttttaat
ttttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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