KEGG   Rhodopseudomonas palustris TIE-1: Rpal_0003
Entry
Rpal_0003         CDS       T00722                                 
Name
(GenBank) DNA replication and repair protein RecF
  KO
K03629  DNA replication and repair protein RecF
Organism
rpt  Rhodopseudomonas palustris TIE-1
Pathway
rpt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rpt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Rpal_0003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpt03400]
    Rpal_0003
DNA repair and recombination proteins [BR:rpt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Rpal_0003
SSDB
Motif
Pfam: SMC_N AAA_21 AAA_23 AAA_15 AAA_27 ABC_tran AAA_29 SbcC_Walker_B AAA_30 IstB_IS21
Other DBs
NCBI-ProteinID: ACE98565
UniProt: B3QK01
Position
3234..4373
AA seq 379 aa
MTAARITRLTLTHFRNYRGASLTTTADQVVLVGPNGAGKTNCLEAISFLSPGRGLRRATL
EDVANHEGDGSWAVSAEVEGALGLATLGTGIEPPRGDTPTTRRCRIDREPVGSAAAFGDH
LRMVWLTPSMDGLFMGAASERRRFFDRLVLAIDSGHSARVSALDRSLRSRNRLLEDIRNA
DSHWLDAIERETAELAIAVAAQRGQTALKLAAMLDARGATSAFPSAKLMLDGWMENALTS
EPATAVEDRYRAILRDSRGRDAAAGRTLDGPHLTDLEVIYAPKAMPARDASTGEQKALLI
GLVLAHAQLVAETTSITPLLLLDEVVAHLDPGRREALFTELGKLGAQVWMTGADPMAFAE
IGPAAGIFDVESGRIRPRG
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgaccgccgcccgcatcacacgcctgacgctgacgcattttcggaattatcgcggggcg
tcgctgaccacgaccgccgaccaggtggtgctggtcgggccgaacggggctggcaagacc
aattgcctggaggcgatctcatttctgtcgccgggccgcggcctgcggcgggccacgctg
gaagacgtcgccaaccatgagggcgacggctcctgggcggtatcggccgaggtcgaaggc
gcgctcgggctggcgacgctcggcaccgggatcgagccgccgcgcggcgatacccccaca
acgcggcgctgccggatcgaccgcgagccggtcggatcggcggcggcgttcggcgaccat
ctgcgcatggtgtggctgacgccgtcgatggacgggctgttcatgggcgcggcctcggaa
cgccggcgatttttcgaccgcttggtgctggcgatcgacagcggccattcggccagggtc
tccgcgctcgatcgcagcctgcggtcgcgcaaccgcctgctggaagacatccgcaacgcc
gactcgcactggctcgacgcgatcgagcgcgaaacagccgagctggcgatcgcggtggcg
gcccagcgcggccagaccgcgctcaagctcgccgcgatgctcgatgcccgtggcgccacc
tcggcctttccgtccgccaagctcatgctcgacggctggatggagaacgcgctgacctcc
gagccggcaaccgcggtggaagaccgctatcgcgccatcctgcgcgacagccgcggacgc
gacgccgccgctggccggacgctcgacggcccgcacctcaccgatctcgaagtgatctac
gcacccaaggcgatgccggcgcgcgatgcctccactggcgagcagaaggcgctgctgatc
ggcctggtgctggcgcacgcgcagctcgtcgccgagaccacttcgatcacgccgctgctg
ctgctcgacgaagtggtggcgcatctcgatcccggccgacgcgaagcgttgttcaccgag
ctcggcaagctcggcgcgcaggtctggatgaccggcgccgatcctatggcgttcgccgaa
atcggtccggctgcgggcattttcgacgtcgagagcggacgaatcaggccgcgcggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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