KEGG   Rhodopseudomonas palustris TIE-1: Rpal_1407
Entry
Rpal_1407         CDS       T00722                                 
Name
(GenBank) ABC transporter related
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
rpt  Rhodopseudomonas palustris TIE-1
Pathway
rpt02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rpt00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rpal_1407
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rpt02000]
    Rpal_1407
Transporters [BR:rpt02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Rpal_1407
SSDB
Motif
Pfam: ABC_tran oligo_HPY AAA_21 SMC_N nSTAND1 AAA_16 AAA_29 ATP-synt_ab AAA_22 Mg_chelatase nSTAND3 NACHT DUF87 Sigma54_activat PRK AAA_23 ABC_ATPase
Other DBs
NCBI-ProteinID: ACE99946
UniProt: B3QJ65
Position
complement(1484047..1485699)
AA seq 550 aa
MTDNVLEIDNLVVRLGRSGHGDKVIDGISLNVRAGETMCLVGESGSGKSVTSLTTMGLLP
KGVLQASSGEIRLAGENVLAASERRLRQLRASRMAMIFQEPMTALNPVVPVGKQIDEVLR
FHTDLPARERRRRILDMMQQVRLPDVERIFASYPHRLSGGQRQRIMIAMALVLEPKLLIA
DEPTTALDVTTQKQILTLIRELQQAHGTAVLFITHDMGVVAEIADRVAVMRQGRLVETGP
LEAVLRRPQMEYTRNLLSAVPSLVPRAPRPANRTPVVLEANELGKVYRERSLLGRHREVV
AAQDVTLTLHKGRTLGIVGESGSGKSTVARCIVRLIDPTSGGIRLAGREISELSRRLLRP
HRQKIQIIFQDPYRSLNPRVSVGESIAEGPINYGMPRAQAMAKARQLLELVHLPADAISR
FPHQFSGGQRQRIAIARALALDPDVLVADEAVSALDVSVQAQVLNLLDEIQTRLGIALLF
ITHDLRVAAQICDDVAVMEKGRVVEQGPAAEVLTHPKQAYTRQLLEAAPGRHWDFANFRP
VQEAPQAAVS
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgaccgataacgtcctcgaaatcgacaacctcgtcgtccgcctcggccgcagcgggcat
ggcgacaaggtgatcgacggcatctcactcaacgtgcgggccggcgagacgatgtgtctg
gtcggcgagagcggctcaggcaaatcggtgacgtcactcacgaccatgggactgctgccg
aagggcgtgctgcaagcgtccagcggcgagatccggctggccggcgagaacgtgttggcg
gccagcgagcggcggctgcgccaactccgtgcttcgcggatggcgatgatctttcaggag
ccgatgacggcgctgaatcctgtggtgccggtcggcaaacagatcgacgaggtgctgcgc
ttccacaccgacctgcccgcgcgcgaacgccgccgccgcatcctcgacatgatgcagcag
gtgcggctgccggatgtcgaacggatcttcgcatcctatccgcaccggctatcgggcggt
cagcgtcagcgcatcatgatcgcgatggcgctggtgctcgaaccgaaactgctgatcgcc
gacgagccaaccacggcgctcgacgtcaccacgcaaaagcaaatcctgacgctaatccgc
gagctgcagcaggcgcacggcaccgcggtgctgttcatcacccacgacatgggcgtggtc
gccgagatcgccgaccgcgtcgcggtgatgcggcagggccggctggtcgagaccggtccg
ctggaggcggtgctacgccgcccgcagatggagtacacccgcaatctgttgtcggcggtc
ccgagcctggtgccgcgggcgccgcgccctgcgaaccgcacgccggtcgtgctggaagcc
aacgagctcggcaaggtgtatcgcgaacgctcgttgctcggccgtcaccgcgaggtggtg
gcggcgcaggacgtgacgctgacgctgcacaagggccgcaccctcggcatcgtcggcgaa
agcggctcgggcaagtccaccgtggcgcgctgcatcgtccggctgatcgatccgacctcg
gggggcatccggctcgccggccgcgagatatccgagctgtcgcgccggttgctgcggccg
catcggcagaagatccagatcatctttcaggacccgtatcgctcgctcaatccgcgcgtc
agcgttggtgagagcatcgccgagggaccgatcaattacggcatgccgcgcgcccaggcg
atggccaaggcacggcagttgctcgaactggtgcatctgccggcggatgcgatctcgcgc
ttcccgcatcagttctccggcggtcagcgccagcgcattgcgatcgcccgcgcgctcgcg
ctcgatcccgacgtgctggtcgcggacgaagcggtgtcggcgctcgacgtttcggtgcag
gcgcaggtgctgaatctgctcgacgagatccagacccggctcggcatcgcgctgttgttc
atcacccacgatctgcgcgtcgcggcgcagatctgcgacgacgtcgcagtgatggaaaaa
ggccgcgtcgtcgaacagggacccgccgccgaagtgctgacccaccccaagcaagcctac
acccgccaactgctcgaagccgctcccggccggcattgggacttcgccaatttccgtccg
gtccaagaggcaccgcaggcggcggtgagttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (26)   

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