KEGG T06598: CFBP5875

Agrobacterium pusense CFBP5875: CFBP5875_19710

Entry

CFBP5875_19710    CDS       T06598

Name

(GenBank) RNA pseudouridine synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

rpus Agrobacterium pusense CFBP5875

Brite

KEGG Orthology (KO) [BR:rpus00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rpus03009]
    CFBP5875_19710
   03016 Transfer RNA biogenesis [BR:rpus03016]
    CFBP5875_19710
Enzymes [BR:rpus01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     CFBP5875_19710
    5.4.99.29  23S rRNA pseudouridine746 synthase
     CFBP5875_19710
Ribosome biogenesis [BR:rpus03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CFBP5875_19710
Transfer RNA biogenesis [BR:rpus03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    CFBP5875_19710

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

QCL86818

Position

linear:complement(1212293..1212961)

AA seq 222 aa
MSSELSNLIYNPPLDPWLTIVHRDDDLLVLDKPSGLLSVPGRDPALSDSLMTRVQKQFPK
ALMINRLDKDTSGIVLMSLNRRAHAAIASQFENRQTRKSYVAIVWGEVPGEAGEVDLPLA
IDPENKPRHRVDHENGKSAQSLWRVLERLPLPATRLALTPLTGRTHQLRVHMKALGHPIL
GDEFYAEGEALSAAPRLMLHAQEVAFRHPDGRDVIYTVPSPF

NT seq 669 nt +upstreamnt +downstreamnt
atgtcatccgagctttccaacctcatctataatccgccactcgacccttggctcaccatc
gtgcaccgcgatgacgatctgctggtgcttgataagccgagcgggctgttatcggtgccg
gggcgcgatccggcgctttccgacagcctcatgacgcgtgtgcagaagcagttcccgaaa
gcgctgatgatcaaccggctggacaaggacacctcgggcatcgtgctgatgtcgctgaac
cgcagggcgcacgccgcaattgcgtcgcagtttgaaaaccgtcagacgcgcaaatcctat
gttgccattgtctggggagaggttcccggagaggccggagaagtggacctgccgctcgcc
atcgatcccgagaacaagccccgccaccgggtcgaccacgaaaatggcaagtccgcgcag
agcctgtggcgggtgctggaacgattgccgcttcccgcaacgcggctggcgctcactccc
ctcacagggcgcacccatcaattgcgggtgcatatgaaggcgcttggccatcccattctc
ggcgatgaattttatgccgaaggtgaggcgctctcagccgcgccccgcctgatgctgcat
gcgcaggaagtggcattccgtcatccggacggccgggatgtcatctataccgttccctct
ccgttctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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