KEGG T01789: M9W

Rickettsia prowazekii Chernikova: M9W_02415

Entry

M9W_02415         CDS       T01789

Symbol

truB

Name

(GenBank) tRNA pseudouridine synthase B

K03177

tRNA pseudouridine55 synthase [EC:5.4.99.25]

Organism

rpw Rickettsia prowazekii Chernikova

Brite

KEGG Orthology (KO) [BR:rpw00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rpw03016]
    M9W_02415 (truB)
Enzymes [BR:rpw01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     M9W_02415 (truB)
Transfer RNA biogenesis [BR:rpw03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    M9W_02415 (truB)
Prokaryotic type
    M9W_02415 (truB)

SSDB

Motif

Pfam:

TruB_N TruB_C_2

Other DBs

NCBI-ProteinID:

AFE49308

Position

617953..618831

AA seq 292 aa
MGNYWLNFYKPRGISSAKLVNIVKKIIGKTKIGHAGTLDVEAEGILPLAVGEATKLIQLL
IDARKTYIFSVKFGTQTDSGDYTGKVIASKDYIPSQEEVYTVCSKFIGNIRQVPPIFSAI
KVNGVRAYKLAREGKIVELKPRNITIYDLKCLNFDKENAIATYYTECSKGTYIRTLTEDL
ALSLQSLGFVLELRRTQVGIFKAENAIKIKSSDEITKNFIEKKSIKIEAILDDILVLDAT
DDQAQRIKYGQKCVFDYEEDVSFLWVRYNGTLLAIGSLNKSCFNSLRVFNLL

NT seq 879 nt +upstreamnt +downstreamnt
atgggtaattattggttaaatttttataaaccaagaggtataagttctgctaaacttgtt
aatatagtaaaaaaaataatcggtaaaactaagataggacatgccggtactttagatgta
gaagcagaaggaatattacctcttgcagtaggtgaagctacaaaactaatacagttgcta
attgatgctaggaaaacctatatttttagtgtaaaattcggcacacaaacagatagcgga
gattatactggtaaagtaatagcatcaaaagattatatcccgtctcaagaagaggtatac
acagtatgttctaagtttataggtaatataagacaagtacccccgattttttctgctatt
aaagttaatggtgtaagagcgtataaattagctagagaaggaaaaatagtagaattaaag
ccacgcaatataactatatatgatctaaaatgtttgaattttgacaaagaaaatgctatt
gctacatactatacggaatgctcaaaaggtacttatataaggactttaacagaagatttg
gcattatccttgcaaagtttaggatttgtgctagaattgcgccgtactcaagttggaata
tttaaagcagaaaatgctattaaaattaaatcatctgacgaaattaccaaaaattttata
gaaaaaaaaagtataaagatagaagcaatactggacgacatcctggttcttgatgcaacc
gatgaccaagcacaaagaattaaatatggacaaaaatgtgtatttgattatgaagaagac
gttagttttttatgggttcgatataatggtactctacttgcaataggtagcttaaacaag
agttgttttaattctttacgagtatttaatttattataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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