KEGG   Rhodopseudomonas palustris DX-1: Rpdx1_0076
Entry
Rpdx1_0076        CDS       T01381                                 
Name
(GenBank) double-strand break repair helicase AddA
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
rpx  Rhodopseudomonas palustris DX-1
Brite
KEGG Orthology (KO) [BR:rpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpx03400]
    Rpdx1_0076
Enzymes [BR:rpx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Rpdx1_0076
DNA repair and recombination proteins [BR:rpx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     Rpdx1_0076
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_30 DEAD AAA_16 DUF3638
Other DBs
NCBI-ProteinID: ADU41720
UniProt: E6VF50
Position
complement(79822..83307)
AA seq 1161 aa
MSRAIPNEARARQEIASDPSASVFVSANAGSGKTHVLVQRVIRLLLDGVSPERILCITFT
KAAAANMAERVFTTLGHWVKLDDEELSAAIRATGIKAVGPSLLAQARKLFACALETPGGL
KVQTIHALCTRLLQQFPFEANVPARFSVLDDRDQAELMQRASLDVLLRAAAAPDSDAGRA
LAFAMTSAADVTFRDVVQEACMSRDRFMAWVAQAGSVERAMAQLSATLGVAPDDSCEAAD
RDIVDGPNLPRSEWAAVAATFEGGSANDQAQARRLREALALTDAAQIDAYLQVFFTKDSG
LRKSLITKKLGDGAPGLAERLQREGARLGALLERRRALALRERTRALLVIAAQVAGNIAR
EKRERGLLDYDDLIDKTLAMLDSGAAGWVHFKLDRGVDHVLIDEAQDTSPKQWKIVARLI
DEFTAGEGARDGIKRTIFAVGDEKQSIFSFQGAVPKEFAEWRDLLQRRFTGAGLTFEKVS
FNYSFRSGAAILQSVDHVFRDPAIYRSIHADIDYPVHASLADAGPSLIDLWPLEVPDDRQ
QIEGWQAPFDAVSETSPEVRLADKVRGEISELIGRGTRTGPVGQRRPLSYGDVLILVRRR
GSAFDAVIQALKRGGIPVAGADRLKLTEHIAIIDLMNLADALLLPQDDLALAVALKSPLF
GLDDDDLFKLAWQRKGPLRAALADHAAGDQRFAAVQRRLESYAARAQVETPFGFYAWLLG
GDGADSGRARILRRLGPEANDALDEFLELALSFEQKRAPSLQGFMAWLREADTEIKRDME
ISRDEVRVMTVHGAKGLEAPVVFLIDTTSSPADTQRLNLIRLPGGNAAPGSVPAMVWAGR
KADDPSVVEQARSAMIEETEDEYRRLLYVAMTRAADRLIVGGCMPGNRNEVRPHSWYDLI
SKGLESSGLAMQSVPPDGVIKRYCRPEDVIEETGSAMPSQEATVTSLPDWLRRPAPGLPS
AEQVLRPSDAEDDDRRRLRPGESDASRSRALQRGTLVHRLLQSLPDIAAGDRSAAAGRFL
ARNAPDWNSEDRDALAAQVLGLIADARFAAVFGPGSRAEVPIVGRLQRRGGPVLVSGQID
RLVVTETEVLIVDYKTNHAPPRVEAEAPRAYVRQLARYRAVLGAIYPQRTVRAALLWTEA
AEIMEISASALDAEQADLTVP
NT seq 3486 nt   +upstreamnt  +downstreamnt
atgagccgcgctattcccaacgaagcccgcgcccgacaggagatcgcgtccgatccgtcg
gcatcggtgttcgtttccgccaatgccggctcgggtaagacccacgtcctggttcagcgc
gtgatccggctgctgctcgacggcgtctcgccggagcgcatcctgtgtatcaccttcacc
aaggcggccgccgccaatatggcggagagggtgttcaccacgctgggtcactgggtgaag
ctcgacgacgaggaactgtcggcggcgatccgtgccaccggcatcaaggcagttggtcct
tcgctgctggcgcaggcgcgaaaactgttcgcctgcgcgctggagacgccgggcgggctg
aaggtgcagaccatccacgcgctgtgcacgcggttgctgcagcagtttccgttcgaggcc
aacgttccggcgcggttcagcgtgctcgacgatcgcgaccaggccgaactgatgcagcgc
gccagcctcgacgtgctgctgcgcgccgctgcggcgccggacagcgatgccgggcgcgcg
ctggcatttgcgatgaccagcgccgccgacgtcaccttccgcgacgtggtccaggaagcc
tgcatgagccgcgatcgcttcatggcgtgggtggcgcaggccggcagtgtcgagcgtgcg
atggcgcaattgtctgccacgctcggcgttgcgccggacgatagctgcgaagcggccgat
cgcgacatcgtcgatggtccgaacttgccgcggtcggaatgggctgcggtcgccgccacg
ttcgaaggcggcagcgccaacgatcaggcgcaggctcggcgcttgcgcgaggcgctggcg
ctcactgatgcggcgcagatcgacgcctatctccaggtgttcttcaccaaggacagcggc
ctgcgcaaaagcctgatcaccaagaagctaggcgacggcgcgcccggcctcgccgagagg
ctgcagcgggaaggcgcgcgacttggtgctctgctcgaacggcgccgcgcattggccttg
cgcgaacgcacgcgggcgctgctggtgatcgccgcgcaggttgccggcaacatcgcgcgc
gagaagcgcgagcgtgggctgctcgattacgacgacctgatcgacaagacgctggcgatg
ctcgacagcggcgcggccggatgggtgcatttcaagctcgaccgcggtgtcgatcacgtg
ctgatcgacgaagcgcaggacacctcgccgaagcaatggaagatcgtcgcccggctgatc
gacgaattcaccgccggcgagggcgcgcgcgatggcatcaaacgcaccatcttcgcggtc
ggcgacgagaagcagtcgatcttctcctttcagggcgcggtgccgaaggagttcgccgag
tggcgtgacctgttgcagcggcggttcaccggcgccggcctgaccttcgaaaaggtttcg
ttcaactactcgttcaggtccggcgccgcgatcctgcagtcggtcgatcacgtgtttcgc
gatccggcgatctatcgcagcatccacgccgatatcgactatccagtccacgcgtcgctc
gcagatgccggaccgagcctgatcgatctgtggccactggaagttccggacgatcgtcag
cagatcgaaggttggcaggcgccgttcgacgcggtgtccgaaaccagtcccgaggttcgg
cttgccgacaaggtgcgaggcgaaatcagcgaactgatcggccgcggcacccggaccggg
ccggtcggccagcgccgtccgctgagctacggcgacgtgctgatcctggtgcggcggcgc
ggctcggcgttcgacgcggtgatccaggcattgaagcgcggcggcatcccagtggcgggc
gccgaccggctgaagctgaccgagcacatcgcgatcatcgacctgatgaatctcgccgac
gcactgctgctgccgcaggacgatctggcgctcgcagtggcgctgaaaagtccgctgttc
gggctcgacgacgacgacctgttcaagctggcctggcagcgcaagggcccgctccgtgcc
gcgctcgccgatcatgccgcgggcgatcagaggtttgcggccgtgcagcgccggctggag
agctacgcggcgcgggcgcaggtcgaaacgccgttcggattctacgcctggctgctcggc
ggcgatggcgccgacagcggccgcgcccgaatcctgcgccggctcgggccggaggccaac
gatgcgctcgacgagtttctcgaactggcgcttagcttcgaacagaagcgggcgccgtcg
ctgcagggcttcatggcgtggctgcgcgaggccgacaccgagatcaagcgcgacatggag
atctcccgcgacgaagtccgggtgatgacggtgcacggcgccaaggggttggaagcgcct
gtggtgttcctgatcgacaccacctcgtcgccggccgacacccagcggctcaatctgatt
cggctgcccggcggcaacgccgcgccgggctcggtccccgcgatggtgtgggccggccgc
aaggccgacgatccgagcgtcgtcgagcaggcgcgcagcgcgatgatcgaggagaccgag
gacgagtatcgccggctgctttatgttgcgatgacccgcgcggccgaccggctgatcgtc
ggcggctgtatgccgggcaaccgcaacgaggtgcgcccgcattcctggtacgacctgatc
agcaaggggctggaatcgtccgggctggcgatgcagtcggtcccgccggacggcgtaatc
aagcgctattgccgcccggaggatgtgatcgaggaaaccggctctgcgatgccgagccag
gaggcgacggttacgtcgctgcccgattggctgcgccggccggcgcccggtctgccgtcc
gccgagcaggtgctgcggccctcggatgccgaggacgacgatcggcgccggctgcgccca
ggggagtctgatgccagccgcagccgcgcgctgcagcgcggcacgctggtgcatcggctg
ctgcaatcgttgccggacattgccgctggcgatcgctccgcggcggccggccggttcctc
gcccgcaacgcacccgattggaatagcgaagaccgcgacgcgctcgccgcccaggtgctc
gggctgattgccgatgccaggttcgcggcagtgttcggccccggcagccgcgccgaggtg
ccgatcgtcggccggctgcagcgccggggcggcccggtgctggtgtccggtcagatcgac
cgcctggtggtgaccgagaccgaggtcctgatcgtcgattacaagaccaaccatgctccg
ccgcgggtcgaggccgaggcgccgcgcgcttacgtccgccagctcgcccgctaccgcgcg
gtgctcggcgcgatctatccacagcgcaccgtccgggccgccctgctctggactgaagcg
gctgaaatcatggagatttcggcctctgcgctggacgcggagcaggccgatctgacggtg
ccgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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