KEGG   Rhodopseudomonas palustris DX-1: Rpdx1_0492
Entry
Rpdx1_0492        CDS       T01381                                 
Name
(GenBank) nickel-dependent hydrogenase large subunit
  KO
K06281  hydrogenase large subunit [EC:1.12.99.6]
Organism
rpx  Rhodopseudomonas palustris DX-1
Pathway
rpx00633  Nitrotoluene degradation
rpx01120  Microbial metabolism in diverse environments
rpx02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rpx00001]
 09100 Metabolism
  09111 Xenobiotics biodegradation and metabolism
   00633 Nitrotoluene degradation
    Rpdx1_0492
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Rpdx1_0492
Enzymes [BR:rpx01000]
 1. Oxidoreductases
  1.12  Acting on hydrogen as donor
   1.12.99  With unknown physiological acceptors
    1.12.99.6  hydrogenase (acceptor)
     Rpdx1_0492
SSDB
Motif
Pfam: NiFeSe_Hases Quaking_NLS
Other DBs
NCBI-ProteinID: ADU42132
UniProt: E6VKK3
Position
529919..531712
AA seq 597 aa
MTNVTTPNGFKLDNAGRRVVVDPVTRIEGHLRVEVNVDSSNVIRNAVSTGTMWRGIEVIL
KGRDPRDAWAFTQRICGVCTGTHALTSVRAVENALNISVPENANTIRNIMQLALYVHDHL
VHFYHLHALDWVDVVSALKADPKATSALAQSISPWPMSSPGYFKDLQIRLTKFVESGQLG
PFKNGYWGHPAYKLPPEANLMAVAHYLEALDFQKEIVKIHTIYGGKNPHPNWLVGGVPCS
INVDGTGAVGAINIERLNLVSSIIDQTVAFVEQVYVPDLVAIAGFYKDWLYGGGLSSKSV
MSYGDLPEYANDYSDKSLMLPRGVIINGNLNEVLPVDLSAPDQIQEFVTHSWYKYADEGK
GLHPYDGVTEPNFVLGPNTKGTRTNIEALDESAKYSFLKAPRWKGHAVEVGPLARYIIGY
AQGKPEFKEPTEKLLKTLDVPVTALFSTLGRTAARGLECQWAARKLRAAQDKLMASIKAG
DLSTANTDKWHPSSWPKDVKGVGFTEAPRGALAHWVRIKDTRIDNYQCVVPTTWNGSPRD
PQGNIGAFEAALLDTPMADPNQPLEIIRTLHSFDPCLACSTHVMSEDGQEMARVKVS
NT seq 1794 nt   +upstreamnt  +downstreamnt
atgaccaacgtcacgactcccaacggcttcaagctcgacaatgccggccgccgcgtcgtc
gtcgatccggtgacccggatcgaggggcacctgcgcgtcgaggtcaatgtcgattcgagc
aacgtgatccgcaacgcggtgtcgaccggcacgatgtggcgtggcatcgaggtgatcctc
aagggccgcgatccgcgcgacgcctgggcgttcacccagcggatctgcggcgtctgcacc
ggcactcacgcgctgacctcggtgcgcgcggtcgagaacgcgctgaacatcagcgtgccg
gaaaacgccaacaccatccgcaacatcatgcagctcgcgctgtatgtgcacgaccatctg
gtccacttctatcatctgcacgcgctcgactgggtcgacgtggtgtcggccctgaaggcc
gatccgaaagccacctcggcgctggcgcagtcgatctcgccgtggccgatgtcgtcgccc
ggctatttcaaggatctgcagatccgcctgaccaaattcgtcgagagcggccagctcggt
ccgttcaagaacggctattggggtcatccggcctacaagctgccgcctgaagccaatctg
atggcggtggcgcattatctcgaggcgctcgatttccagaaggaaatcgtcaagatccac
accatctacggcggcaagaacccgcatccgaactggctggtcggcggcgtgccgtgctcg
atcaatgtcgacggcaccggcgcggtcggcgcgatcaacatcgagcggctcaatctggtg
tcgtcgatcatcgaccagaccgtcgccttcgtcgagcaggtctatgtgccggatctggtg
gcgatcgccgggttctataaggactggctgtacggcggcggcctgtcgtcgaagtcggtg
atgtcctacggcgacctgccggaatacgccaacgactattccgacaagagcctgatgctg
ccgcgcggcgtgatcatcaacggcaatctcaacgaggtgctgccggtcgatctgagcgcg
ccggaccagatccaggaattcgtcacgcactcctggtacaaatacgccgacgagggcaag
ggcctgcatccctatgacggcgtcaccgagccgaacttcgtgctcggcccaaacaccaag
ggcacccgcaccaacatcgaggcgctggacgagtccgccaaatactcgttcctcaaggcg
ccgcgctggaagggccacgccgtcgaggtcggtccgctggcgcgctacatcattggctat
gcccagggcaagccggagttcaaggagccgaccgaaaagctcctgaagacgctcgatgtg
ccggtcaccgcgctgttctcgacgctgggccgcaccgcggcgcgcggcctggaatgccag
tgggcggcgcgcaagctgcgcgcggcgcaggacaagctgatggccagcatcaaggccggc
gatctgtccaccgccaacaccgacaagtggcacccgtcgagctggccgaaagacgtcaag
ggcgtcggcttcaccgaggcgccgcgcggcgcgctggcgcactgggtcaggatcaaggac
acccggatcgacaattatcagtgcgtggtgccgaccacctggaacggcagcccgcgcgat
ccgcaaggcaatatcggtgcattcgaggcggcgctgctcgacaccccgatggccgatccg
aaccagccgctggagatcatccgcacgctgcattcgttcgatccgtgcctggcctgctcg
acccacgtgatgagcgaggacggtcaggaaatggcgcgggtcaaggtgagctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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