KEGG   Rhodopseudomonas palustris DX-1: Rpdx1_2486
Entry
Rpdx1_2486        CDS       T01381                                 
Name
(GenBank) histone family protein DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
rpx  Rhodopseudomonas palustris DX-1
Brite
KEGG Orthology (KO) [BR:rpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rpx03032]
    Rpdx1_2486
   03036 Chromosome and associated proteins [BR:rpx03036]
    Rpdx1_2486
   03400 DNA repair and recombination proteins [BR:rpx03400]
    Rpdx1_2486
DNA replication proteins [BR:rpx03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Rpdx1_2486
Chromosome and associated proteins [BR:rpx03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    Rpdx1_2486
DNA repair and recombination proteins [BR:rpx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      Rpdx1_2486
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: ADU44077
UniProt: E6VFI5
Position
complement(2688215..2688526)
AA seq 103 aa
MAKKAVAKSATPATVTLKHLAAALAEEHELSKKQTEAILGDMVTRITKHLKKGERIRIVG
LGILQVRKRAARMGRNPATGEQIQIKASKKVAFRAAKELKEAI
NT seq 312 nt   +upstreamnt  +downstreamnt
atggcgaagaaagcagttgccaaatccgcaacgccggcgacggtgaccctgaagcatctc
gcagcagcgctcgccgaagagcacgagctgtcgaagaagcagaccgaagccattctcggc
gacatggtgacccgcatcaccaagcacctgaagaagggcgagcgcatccgcatcgtcggc
ctcggcattctccaggtccgcaagcgcgccgcccgcatgggccgcaacccggccaccggc
gagcagatccagataaaggccagcaagaaggtggcgttccgcgccgccaaggagctgaag
gaagcgatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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