KEGG   Rhodopseudomonas palustris DX-1: Rpdx1_2642
Entry
Rpdx1_2642        CDS       T01381                                 
Name
(GenBank) exodeoxyribonuclease III Xth
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
rpx  Rhodopseudomonas palustris DX-1
Pathway
rpx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rpx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Rpdx1_2642
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpx03400]
    Rpdx1_2642
Enzymes [BR:rpx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     Rpdx1_2642
DNA repair and recombination proteins [BR:rpx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Rpdx1_2642
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: ADU44228
UniProt: E6VHN4
Position
complement(2827995..2828786)
AA seq 263 aa
MRIATWNVNSVRQRLDHLLTWLKDSQSDVVCLQEIKCVDEAFPREPIEALGYNVVTHGQK
TFNGVALLSKYPLEEANPGLAGDDGDVHARFLEGVVSLKHGVVRVACLYLPNGNPVGSEK
YPYKLSWMARLRDYAQQRLRTEEPLILAGDFNVIPQPGDVHNPAAWTEDALFRPETRESF
QALLGLGFTDALRATTDAPGQYTFWDYQAGAWQKNWGLRIDHLLLSPQAADRLRHVGIDS
YVRNWEKPSDHVPVWADLDLEAA
NT seq 792 nt   +upstreamnt  +downstreamnt
atgcggattgccacctggaacgtcaattcggtccgacagcggctggatcacctcctgacc
tggctgaaggatagccagtccgacgtggtctgcctgcaggagatcaaatgcgtcgacgag
gcttttccgcgcgagccgatcgaggcgctcggctacaacgtcgtcacccacggccagaag
actttcaacggcgtggcgctgctgtcgaaatatccgctcgaggaagccaatccgggcctc
gccggtgacgatggcgacgttcatgcccggtttctcgaaggcgtggtgtcgctgaagcac
ggcgtcgtgcgcgtcgcctgcctgtatctgccgaacggcaatccggtcggcagcgagaag
tatccctacaaactgagctggatggcgcggctgcgcgactacgcccagcagcgactgagg
accgaggagccgctgatcctggccggcgacttcaacgtcatcccgcagccgggcgacgtg
cacaatccggcggcctggaccgaggatgcgctgttccgccccgagacccgcgagagcttc
caggccctgctcggcctcggctttaccgacgcgctgcgcgccaccaccgatgcgcccggc
caatacactttctgggactatcaggccggcgcctggcagaagaactgggggctgcggatc
gatcacctgctgctgtcgcctcaggccgccgaccggctgcgccatgtcggcatcgacagc
tatgtgcgcaattgggaaaagccctcggaccacgtcccggtgtgggcggatctcgatctg
gaagcggcgtaa

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