KEGG   Rhodococcus pyridinivorans SB3094: Y013_04495
Entry
Y013_04495        CDS       T02974                                 
Name
(GenBank) glycine dehydrogenase
  KO
K00281  glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
Organism
rpy  Rhodococcus pyridinivorans SB3094
Pathway
rpy00260  Glycine, serine and threonine metabolism
rpy00630  Glyoxylate and dicarboxylate metabolism
rpy00785  Lipoic acid metabolism
rpy01100  Metabolic pathways
rpy01110  Biosynthesis of secondary metabolites
rpy01200  Carbon metabolism
Module
rpy_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rpy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    Y013_04495
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Y013_04495
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Y013_04495
Enzymes [BR:rpy01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     Y013_04495
SSDB
Motif
Pfam: GDC-P GcvP2_C Aminotran_5 Beta_elim_lyase Trypan_glycop
Other DBs
NCBI-ProteinID: AHD19986
UniProt: V9X964
Position
complement(951032..953884)
AA seq 950 aa
MTDAVTSNFADRHIGPDTAGLNRILDVVGVDSLDALATAAVPAAILDDRADNVPTGLDVL
DAPRSEHDVLAELKALASQNTVATSMIGHGYYDTLTPPVLLRNIIENPAWYTAYTPYQPE
ISQGRLEALLNFQTMVADLTGMEIANSSMLDEATAAAEAMTLLRRANRKSKSPRLVVDVD
LFAQTAAVLATRAEPLGIEIVTVDLAADGLPEGEFFGVILQVPGASGRIIDAAPIIAAAH
DRGALVAIGADLLAMTLITPPGEQGADACFGTTQRFGVPMGFGGPHAGYLAVGSAHTRTL
PGRLVGVSVDADGNPAYRLALQTREQHIRREKATSNICTAQVLLAVLAAMYASYHGAEGL
TGIARRVAGHARRLADGLRAGGVEVVHDEFFDTVLVRVPGRVDAVLAAALEAGINLHRVD
DDHVSISCDEATTAAHVDAVLRAFGVTAGDAAEGTALPQALARTSEFLQHAAFTRYRTET
AMMRYLRRLSDKDLALDRTMIPLGSCTMKLNAAAEMEAITWPEFAGLHPFAPADQTAGIR
RLIADLEGWLAAVTGYDAVSLQPNAGSQGEYAGLLAIRHYHLDRGDTDRDICLIPSSAHG
TNAASAVMAGMRVEVVACRPNGDVDLDDLRAKIADHGARLAAIMITYPSTHGVYEHDIAD
ICGAVHDAGGQVYIDGANLNALVGLARPGKFGGDVSHLNLHKTFCIPHGGGGPGVGPIGV
RSHLAPYLPGHPAEPGLGGAGPVSAAPYGSASILPITWAYIKMMGAEGLRRASLTAIASA
NYIARRLDEYFPVLYTGETGMVAHECILDLRPLTKATGVTVDDVAKRLADYGFHAPTMSF
PVAGTLMVEPTESEDIAELDAFIDAMISIRGEIDRVGAGEWPVDDNPLRGAPHTAECLVG
EWNHPYSREIAVFPMGKSRAKVWPAVRRIDGAHGDRNLVCACPPLEAYSG
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgacagatgccgtcacctcgaacttcgccgatcgccacatcggccccgacaccgccggc
ctgaaccggatcctcgacgtcgtgggagtcgattccctcgacgccctcgccaccgccgcg
gtgccggccgccatcctcgacgaccgtgcagacaacgtgccgaccggcctcgacgtcctc
gacgcgccccgctccgagcacgacgtactcgccgaactgaaggcactcgcgtcgcagaac
accgtggcgacgtcgatgatcggccacggctactacgacacgctcacgccgcccgtgctg
ctgcgcaacatcatcgagaaccccgcctggtacacggcctacaccccctaccagccggag
atcagccagggacgcctcgaggcgctgctgaacttccagaccatggtcgccgacctgacc
ggcatggagatcgcgaactcgtcgatgctcgacgaggccaccgccgctgccgaggccatg
accctgctgcgccgcgcgaaccgcaagtccaagagcccgcgcctggtcgtcgacgtcgac
ctgttcgcgcagaccgccgcggtgctggcgacccgcgccgaaccgctcggtatcgagatc
gtcaccgtcgacctcgctgccgacggacttcccgagggcgagttcttcggcgtgatcctc
caggtgcccggcgcttcgggccgcatcatcgacgccgctccgatcatcgcggcggcccac
gaccgcggcgcgctcgtcgccatcggcgccgacctgctggccatgaccttgatcaccccg
cccggggagcagggcgccgacgcgtgcttcggcaccacccagcggttcggtgtgccgatg
ggcttcggcgggccgcacgccggctacctcgccgtcggtagcgcccacacccgcaccctg
cccggacgcctcgtcggtgtctcggtggacgcggacggcaacccggcctaccgcctcgcg
ttgcagacccgtgagcagcacatccgccgtgagaaggccaccagcaacatctgcaccgcc
caggtgctcctcgccgtgctcgcggccatgtacgcctcgtaccacggcgccgaaggcctc
accggcatcgcccgccgcgtcgccgggcacgcccgccgcctcgccgacggtctgcgcgcc
ggtggcgtcgaggttgtccacgatgagttcttcgacaccgtcctcgtgcgcgtcccgggg
cgtgtcgacgccgtgctcgccgccgccctcgaggccggcatcaacctgcaccgggtcgac
gacgatcacgtgtcgatctcgtgcgacgaggccaccaccgcggcgcacgtcgacgcggtc
ctgcgcgccttcggcgtcaccgccggggacgccgccgagggaacggcgctgccgcaggcc
cttgcccgcaccagcgagttcctgcagcatgcggcgttcacccgctaccgcaccgagacc
gcgatgatgcgttacctgcggcgcctgtccgacaaggacctcgccctcgaccggacgatg
atcccgctgggctcgtgcacgatgaagctcaacgccgccgccgagatggaagccatcacc
tggcccgagttcgcgggtctgcaccccttcgctccggcggatcagacggcggggatccgc
cgcctcatcgccgacctcgaaggctggctcgccgcggtgacgggatacgacgccgtgagc
ctgcaacccaacgccggcagccagggcgagtacgcgggtctgctcgcgatccgccactat
cacctcgaccgcggcgacaccgatcgggacatctgcctgatcccgtcgagcgcgcacggc
accaatgccgcatccgccgtgatggcgggcatgcgtgtcgaggtcgtcgcgtgccgcccg
aacggggatgtcgatctcgacgacctgcgcgccaagatcgccgaccacggtgcgcgcctg
gccgcgatcatgatcacctatccgtccacgcacggtgtgtacgagcacgacatcgccgac
atctgcggtgccgtgcacgacgccggcggtcaggtgtacatcgacggtgccaacctcaac
gctctcgtgggtctggcgcggccgggcaagttcgggggcgatgtgagccacctgaacctg
cacaagacgttctgcatcccgcacggtggcggcggtccgggtgtcggcccgatcggcgtc
cgttcgcatctggccccgtacctgccgggccatccggcggagccgggactcgggggagcg
ggaccggtctcggcggcgccctacggatcggcgtcgatcctgccgatcacctgggcgtac
atcaagatgatgggtgccgaggggctgcgtcgcgcgtcgctgacggcgatcgcgtcggcc
aactacatcgcgcgtcgtctcgacgagtacttcccggtgctgtacacgggggagaccggc
atggtcgcccacgagtgcatcctcgatctgcgtccgctgacgaaggcgacgggggtgacg
gtcgacgacgtcgcgaagcgtctggccgactacggcttccacgcgccgacgatgagcttc
ccggtggccggcaccctcatggtcgagcccaccgagagcgaggacatcgccgaactcgac
gcgttcatcgacgcgatgatctcgatccgcggtgagatcgaccgggtcggggcaggggag
tggccggtggacgacaatccgctgcgcggcgctccgcacaccgcggaatgcctggtgggc
gagtggaaccacccgtattcgcgggagatcgcggtgttcccgatggggaagagccgagcc
aaggtttggccggcggtgcggcgtatcgacggcgcacacggcgaccggaacctggtgtgc
gcgtgcccgcccctggaggcgtacagcggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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