KEGG   Rhodococcus pyridinivorans SB3094: Y013_05560
Entry
Y013_05560        CDS       T02974                                 
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
rpy  Rhodococcus pyridinivorans SB3094
Pathway
rpy00020  Citrate cycle (TCA cycle)
rpy00190  Oxidative phosphorylation
rpy00650  Butanoate metabolism
rpy01100  Metabolic pathways
rpy01110  Biosynthesis of secondary metabolites
rpy01120  Microbial metabolism in diverse environments
rpy01200  Carbon metabolism
Module
rpy_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rpy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rpy_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:rpy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    Y013_05560 (sdhA)
   00650 Butanoate metabolism
    Y013_05560 (sdhA)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    Y013_05560 (sdhA)
Enzymes [BR:rpy01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     Y013_05560 (sdhA)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C DAO Pyr_redox_2 HI0933_like Thi4 FAD_oxidored GIDA AlaDh_PNT_C Pyr_redox_3
Other DBs
NCBI-ProteinID: AHD20168
UniProt: V9XCQ7
Position
complement(1163612..1165528)
AA seq 638 aa
MVDVERHKVDVVVIGAGGAGLRAVIEARQRGFSVAVVCKSLFGKAHTVMAEGGCAAAMGN
ANPRDSWQVHFQDTMRGGKFLNNWRMAELHAREAPDRVWELETYGALFDRTPDGRISQRN
FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDHAEHGDYEARVRVFAECTITELLKD
DEGRIAGAFGYWRETGRFVLFEAPAVVIATGGIGKSWKVTSNSWEYTGDGHALALRAGAT
LINMEFVQFHPTGMIWPPSVKGILVTEGVRGDGGVLKNSEGERFMFSYIPPVFKGQYAET
EEEADRWYEDQENNRRTPDLLPRDEVARAINSEVKDGRGTPHGGVFLDIASRMPADEIMR
RLPSMHHQFKELADVDITAEAMEVGPTCHYVMGGIEVDPDTAAAAVPGLFAAGECSGGMH
GSNRLGGNSLSDLLVFGRRAGLGAADYVQSLTSRPIVGDADIDAAARAALSPFDPADTDR
AENPYTLHTDLQQVMQDLVGIIRRADEIERALRELDTLRTRIRNVAVEGHRQFNPGWHLA
LDLRNMLLVCECVARAALQRTESRGGHTRDDHPSMDPEWRRTLLACRLDGGDPFVPDVTV
TTERQQPMRPDLLELFDIDELGKYYTDEELADHPGRRG
NT seq 1917 nt   +upstreamnt  +downstreamnt
atggtggatgtcgaacggcacaaggtcgacgtcgtcgtgatcggagcaggcggcgccggg
ctacgcgcggtgatcgaggcgcggcaacgcggcttctccgtcgccgtggtgtgcaagtcg
ctgttcggcaaggcccacaccgtgatggccgagggcggatgtgccgccgcgatgggcaat
gccaacccccgcgactcctggcaggtgcacttccaggacacgatgcgcggcggcaagttc
ctcaacaactggcggatggccgaactgcacgcccgtgaggcccccgaccgcgtgtgggag
ctggagacctacggagcgctgttcgaccgcacccccgacggacggatcagccagcgcaac
ttcggcggccacacctatccgcgactcgcccacgtcggcgaccgcaccggactcgaactc
atccgcacgatgcagcagaagatcgtgtcgctgcagcaggaggaccacgccgagcacggc
gactacgaggcccgggtgcgggtcttcgccgaatgcaccatcaccgaactgctgaaggac
gacgagggacgcatcgccggtgcgttcggatactggcgcgagaccgggcgtttcgtgttg
ttcgaggcgcccgcggtcgtcatcgccaccggtggtatcggcaagtcgtggaaggtcacg
tcgaactcgtgggagtacacgggcgacggtcacgccctcgccctgcgtgccggcgccacc
ctgatcaacatggagttcgtccagttccacccgacagggatgatctggccgccgagcgtg
aagggcatcctcgtcaccgagggtgtgcgaggcgacggcggagtgctgaagaactccgag
ggggagcggttcatgttctcctatatcccgccggtgttcaaaggccagtacgcggagaca
gaggaggaggccgaccgctggtacgaggaccaggagaacaatcgccgcacgcccgacctg
ctcccgcgcgacgaggtcgcccgcgccatcaactccgaggtcaaggacggccgggggact
ccgcacggcggagtcttcctcgacatcgcctcgcggatgccggctgacgagatcatgcgc
cgcctgccgtcgatgcatcaccagttcaaggaactcgccgacgtcgacatcaccgccgag
gccatggaggtcggcccgacctgccactacgtgatgggcggcatcgaggtcgaccccgac
accgccgctgcggcagtcccggggctgttcgccgccggggaatgttccggtggcatgcac
ggatcgaaccggctgggcgggaattcgctgtccgatctgctggtcttcggtcgccgggca
ggtctcggcgccgccgactacgtgcagagcctcacctcgcggccgatcgtcggcgacgcc
gacatcgacgccgccgcccgtgcggcgctctcgcccttcgatccggccgacaccgatcgc
gccgagaacccgtacaccctgcacaccgacctgcagcaggtcatgcaggatctcgtgggc
atcatccggcgcgcggacgagatcgaacgtgccctgcgcgaactcgacaccctgcgcaca
cggatccgcaacgtcgcggtggagggacaccgtcagttcaacccgggctggcatctcgcc
ctggacctgcggaacatgctcctcgtgtgcgagtgcgtcgcgcgggccgcgttgcagcgc
accgagagccgcggaggacatacccgcgacgaccatccgtcgatggaccccgaatggcgt
cgcaccctgctcgcctgtcgcctggacggcggcgacccgttcgtccccgacgtgacggtc
accaccgaacggcagcaaccgatgcgtcccgacctgctggagctgttcgacatcgacgaa
ctcgggaagtactacaccgacgaggaactcgcggatcatcccggacggaggggttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (36)   

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