KEGG   Rhodococcus pyridinivorans SB3094: Y013_06160
Entry
Y013_06160        CDS       T02974                                 
Name
(GenBank) RNase H
  KO
K22316  ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
Organism
rpy  Rhodococcus pyridinivorans SB3094
Pathway
rpy00860  Porphyrin metabolism
rpy01100  Metabolic pathways
rpy01240  Biosynthesis of cofactors
rpy03030  DNA replication
Module
rpy_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:rpy00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    Y013_06160
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Y013_06160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rpy03032]
    Y013_06160
Enzymes [BR:rpy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.73  adenosylcobalamin/alpha-ribazole phosphatase
     Y013_06160
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     Y013_06160
DNA replication proteins [BR:rpy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     Y013_06160
SSDB
Motif
Pfam: His_Phos_1 RVT_3 RNase_H
Other DBs
NCBI-ProteinID: AHD20281
UniProt: V9XA30
Position
complement(1293778..1294938)
AA seq 386 aa
MTTVVVEADGGSRGNPGPAGYGAVVFDADHRTVLAERQASIGRATNNVAEYKGLIAGLTA
AAELGADEVHVRMDSKLVVEQMSGRWQVKHADMIPLAAQARELAGRFRSVDFTWIPRAEN
AHADRLANAAMDAAAEALLDVASDTVTRPVAPSNAGTENVATPLAVPVPDPAVPPSPGWT
GAVGSPTRLLLLRHGQTSLSVERRYSGRGNPELTELGRDQAVAAARRLGARGGITAVLAS
PLGRARETAAAAADALDLPVTVHDGLIETDFGDWEGLTFAEAARRDPELHRRWLGDTSVR
PPNGESFDEVAKRIASVRDDLLTDYAGSTVLVVSHVTPIKTFLQMALESGPSLLYRLHLD
LASLSIAEFYADGGSSVRLVNDTSHL
NT seq 1161 nt   +upstreamnt  +downstreamnt
gtgacgacggtcgtcgtcgaagcggacggtggttctcgcgggaatcccggaccggccggt
tacggtgccgtggtcttcgatgccgaccatcggaccgtcctcgccgaacgccaggcgagc
atcgggcgcgcgacgaacaacgtcgccgagtacaagggtctgatcgccggtctcacggcc
gccgccgagctcggcgccgacgaggtgcacgtccgcatggattccaagctcgtcgtcgag
cagatgagcggacggtggcaggtcaaacatgccgacatgatcccgctggccgcgcaggca
cgtgagctggccggccggttccgcagtgtcgacttcacgtggatcccgcgtgcggagaac
gcccacgccgatcggttggccaacgccgcgatggacgcggccgccgaagcgctgctggac
gtcgcgtccgacactgtgacgcgtcccgtggcgccgtcgaatgcggggaccgagaacgtc
gccaccccgctggccgtgcctgtgcccgatccggcagtgccgccttcacccggctggacc
ggtgcggtcgggtcaccgacccgtcttctgctgctgcgtcacgggcagacctcgctgtcg
gtcgagcgtcgctactcggggaggggcaacccggagctgaccgaactcggtcgcgaccag
gcggtcgccgcggcccggcgactcggtgcccgcggcgggatcaccgccgtgctggcgtca
ccgctggggcgagcgcgggagacggccgctgcggccgccgacgccctcgatctcccggtg
acggtgcacgacgggctgatcgagacggatttcggcgactgggagggtctcaccttcgcc
gaggccgcgcgtcgcgatcccgaactgcaccgccgctggctcggcgacacctccgtgcga
cccccgaacggcgagagcttcgacgaggtcgccaagcggatcgcctcggtacgcgacgac
ctgctgaccgactacgccggctcgaccgtgctggtcgtctcgcacgtcacgcccatcaag
acgttcctgcagatggcgctcgagtccggcccgtcgctgctgtaccgcctgcacctggat
ctcgcgtcgctcagcatcgccgagttctacgcggacggcggctcgtccgtgcggctcgtc
aacgacacctcgcacctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (2)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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