KEGG   Rhodococcus pyridinivorans SB3094: Y013_06715
Entry
Y013_06715        CDS       T02974                                 
Name
(GenBank) 3-phosphoglycerate dehydrogenase
  KO
K00058  D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
Organism
rpy  Rhodococcus pyridinivorans SB3094
Pathway
rpy00260  Glycine, serine and threonine metabolism
rpy00270  Cysteine and methionine metabolism
rpy00680  Methane metabolism
rpy01100  Metabolic pathways
rpy01110  Biosynthesis of secondary metabolites
rpy01120  Microbial metabolism in diverse environments
rpy01200  Carbon metabolism
rpy01230  Biosynthesis of amino acids
Module
rpy_M00020  Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:rpy00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    Y013_06715
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Y013_06715
   00270 Cysteine and methionine metabolism
    Y013_06715
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rpy04147]
    Y013_06715
Enzymes [BR:rpy01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.95  phosphoglycerate dehydrogenase
     Y013_06715
    1.1.1.399  2-oxoglutarate reductase
     Y013_06715
Exosome [BR:rpy04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   Y013_06715
SSDB
Motif
Pfam: 2-Hacid_dh_C 2-Hacid_dh PGDH_inter ACT NAD_binding_2 IlvN AdoHcyase_NAD GFO_IDH_MocA F420_oxidored UDPG_MGDP_dh_C ACT_4 3HCDH_N
Other DBs
NCBI-ProteinID: AHD20378
UniProt: V9XDD9
Position
complement(1400243..1401835)
AA seq 530 aa
MSQNGRPVVLIADKLAQSTVDALGDGVEVRWVDGPDRPALLAAVPEAQALLVRSATTVDA
EVLAAAPNLKIVGRAGVGLDNVDIAAATERGVMVVNAPTSNIHSAAEHAVALLMSAARQV
PAADRTLRERTWKRSSFNGTEILGKTVGVVGLGRIGQLFAQRLAAFETHVIAYDPYLPAA
RAAQLGIELVDIDELVARADFISVHLPKTKETAGLINAERLSKAKDGVIIVNAARGGLID
EDALYDALVEGKVRAAGLDVFETEPCTDSKLFDLDNVVVTPHLGASTAEAQDRAGTDVAK
SVLLALAGEFVPDAVNVSGGPVGEEVAPWLELVRKLGLLAGTLSPEAVQNVQVVVSGELS
AENTDILGLAALRGLFSASSDEPVTFVNAPKLAEQRGVTVEVEKVSEATTHRSAVEVRAV
APDGHVTSVAGALTGLQQVEKIVNINSRSFDLRAEGHNLIVHYQDRPGVLGTLGTVLGNA
SIDIQAAALSQDAEGPGATVILRVDRVVGDAEVGQITEALDARVAQVDLS
NT seq 1593 nt   +upstreamnt  +downstreamnt
gtgagccagaatggccgtccagtagtcctgatcgccgacaagcttgcgcagtcgaccgtc
gatgcgctcggtgacggtgtcgaggtgcgctgggtcgacggccccgaccgccccgccctg
ctcgcggccgtgcccgaggcccaggcgctgctggtccgctccgcgaccaccgtcgacgcc
gaggtgctcgctgcggcgcccaacctcaagatcgtcggtcgcgccggtgtcggcctcgac
aacgtcgacatcgctgctgccaccgagcgcggtgtgatggtcgtcaacgcgcccacctcc
aacatccactccgccgccgagcacgcggtcgcgctcctcatgtccgcggcgcggcaggtt
cccgccgccgaccgcaccctgcgtgagcgcacctggaagcggtcgagcttcaacggcacc
gaaatcctcggcaaaacggtcggcgtcgtcggcctcggccgcatcggccagctgttcgcc
cagcgtctcgcggcgttcgaaacccacgtcatcgcgtacgacccctacctgccggccgcc
cgcgccgcacagctcggcatcgagctcgtcgacatcgacgagctggtcgcccgcgccgac
ttcatctcggtgcacctgcccaagaccaaggagaccgccggcctgatcaacgccgagcgt
ctgtccaaggccaaggacggcgtcatcatcgtcaacgccgcccgcggtggcctgatcgac
gaggacgcgctgtacgacgcgctcgtcgaaggcaaggtccgcgctgccggcctcgacgtc
ttcgagaccgagccgtgcaccgattcgaagctgttcgacctcgacaacgtcgtcgtcact
ccgcacctcggtgcatccaccgccgaggcccaggaccgcgccggtaccgacgttgccaag
agcgtgctgctcgccctcgccggcgagttcgtgcccgatgccgtcaacgtctccggtggc
cccgtgggcgaggaggtcgcgccgtggctcgagctcgttcgcaagctcggtctgctcgcc
ggcaccctctcgcccgaggccgtgcagaacgtgcaggtcgtcgtcagcggtgagctctcg
gccgagaacaccgacattctcggcctggccgccctccgcggcctgttctcggcgagcagc
gacgagcccgtcaccttcgtcaacgcccccaagctcgcggagcagcgcggcgtgacggtc
gaggtcgagaaggtcagcgaggccaccacgcaccgcagcgccgtcgaggtccgcgccgtg
gcgccggacggacacgtcacgtccgtcgcgggtgcgctcaccggcctgcagcaggtcgag
aagatcgtcaacatcaacagccgcagcttcgacctccgcgccgagggccacaacctgatc
gtccactaccaggaccgtccgggtgtcctcggaacgctgggcaccgtgctcggcaacgcg
agcatcgacatccaggccgcggcgctgagccaggacgcggagggccccggcgccaccgtg
atcctccgtgtcgaccgcgtcgtcggcgacgccgaggtcggacagatcaccgaggcgctc
gacgcgcgcgtcgcccaggtcgacctgtcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (9)   
   KEGG PATHWAY (8)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (2)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (37)   

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