KEGG   Rickettsia prowazekii Dachau: MA3_01605
Entry
MA3_01605         CDS       T01790                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
rpz  Rickettsia prowazekii Dachau
Brite
KEGG Orthology (KO) [BR:rpz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rpz03032]
    MA3_01605
   03400 DNA repair and recombination proteins [BR:rpz03400]
    MA3_01605
Enzymes [BR:rpz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     MA3_01605
DNA replication proteins [BR:rpz03032]
 Prokaryotic type
  DNA Topoisomerases
   MA3_01605
DNA repair and recombination proteins [BR:rpz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MA3_01605
SSDB
Motif
Pfam: Topoisom_bac Toprim Toprim_C_rpt zf-C4_Topoisom HTH_25
Other DBs
NCBI-ProteinID: AFE51672
Position
complement(398206..400536)
AA seq 776 aa
MKLVIVESPAKAKTINKYLGDEFKVIASFGHIRDLPSKKGSVLPDKNFLMEYDISDKAGK
YVDAIVKEARKAEVVYLATDPDREGESISWHVAEVIKEKNKVESDDFFKRVAFNEITKKA
IMNAVANPRKLDTNLVNAQQARRALDYLVGFTLSPLLWRKLPGCKSAGRVQSVALRLICD
REDEIERFKSEEYWDISLKMQNSNNDLFTAKLTHVNDQKLKKFSIINEKEAKDLTQKLKL
QKFYVEKIEKKQQKRQPQPPFITSSLQQEAARKLGFSAKKTMQIAQKLYEGVDIGKETIG
LITYMRTDGVTLSNDAIADIRKLIDKNYGNQYLPIKPRIYQSKVKNAQEAHEAIRPTNIT
YTPDSLKQKLEKDYYKLYELIWHRTIACQMENVIMDLVIANLASENKEYLAKANGSIIAF
DGFYKVYRESLDDEDEEDNKMLPPLKEQEHIKTKEVIPNKHFTEPPPRYSEASLVKKLEE
LGIGRPSTYASILSVLQDRKYVALEKKRFIPEELGRLVTVFLVGFFKKYVEYDFTAGLEN
ELDEIAAGKLEWKTALNNFWRGFNHNIESVNEQKITEIINYLQKALDYHLFGEDKESKVC
PSCKTGQLSLKLGKFGAFLACSNYPECTFKKSIVSGNDNNEDEGDPSTILNDNKILGTDQ
DGVEIYLKKGPYGPYIQLGEQCGKVKPKRTPVPANLKQSEITLEIALKLLNLPLKIGIHK
DSGEEIIIGYSKFGPYIKYMCKFISVPKKYDFLNLSLNDAMKLIQNNKAKLEKKYG
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgaaattagtaatagtagaatcaccagcaaaggcaaaaacgataaataaatatttaggc
gatgagtttaaggttattgcatcattcggtcatattagagatttaccgtctaagaaaggt
tcggtattgcctgataaaaattttttaatggaatatgatatttcagataaagcaggtaaa
tatgtagatgctatagttaaagaggcaagaaaagctgaggtagtatatcttgcaactgat
cctgatcgtgaaggcgaatctatctcatggcatgttgcagaggtaataaaagaaaaaaat
aaggttgaatcagatgatttttttaaaagagtagcatttaatgagattactaaaaaagca
attatgaatgcagttgcaaaccctaggaaactagatactaacttagtcaatgcacagcaa
gcaagaagagctttggactatttagtcggctttaccctttcacctcttttatggcgtaaa
ttacctggatgtaaatcagcaggacgtgtacaatctgtggctctgcgattaatatgtgat
agagaagatgaaatagagcgttttaagtcagaagaatattgggatattagccttaaaatg
caaaatagtaataacgacctatttactgctaaattgacccatgtaaacgatcagaagtta
aaaaaattctcaattattaatgaaaaagaggccaaagatttaacgcaaaaattaaagtta
cagaaattttatgttgaaaagatagaaaaaaaacaacaaaaacgtcaaccacagccacct
tttattacttcatcactacaacaagaagcagcaagaaaattaggttttagtgctaaaaag
acaatgcaaatagcacaaaaactttatgaaggtgttgatataggtaaagaaactatagga
ctgattacttatatgagaactgatggcgttacattatcaaatgacgcaatagcagatata
cgtaagttaatcgataaaaattatggcaatcaatatttaccaattaaacctagaatttat
caatccaaagtaaaaaatgctcaagaagctcatgaagcaataagaccgacaaatattact
tatactcctgatagtttaaaacaaaagctagaaaaagattattataaactttatgaacta
atttggcatagaactatagcctgccaaatggaaaatgttataatggatttagtaattgca
aatttagcttcagaaaataaagaatatttagcaaaagcaaatggatcaattatagcattt
gatggtttttataaggtttatcgtgaaagtctagatgatgaagatgaagaagataataaa
atgctaccacctttaaaagaacaagaacatattaaaactaaagaagttattccaaataag
cattttaccgaaccacctccaagatattcagaagcaagtttagtcaaaaaacttgaagag
cttgggatcggccgtccttcaacttatgctagtattttatcagttttacaagatcggaaa
tatgttgcacttgagaaaaaacgttttatacctgaagagcttggacgtttggtgacagta
ttcttagttgggttttttaagaaatatgtagaatatgattttactgcaggtcttgaaaat
gaattagatgaaatagctgcaggaaaacttgaatggaaaactgctttaaataatttttgg
aggggttttaatcataatattgagtcggtaaatgaacaaaaaataaccgagattattaac
tatttacagaaagctcttgattatcatttatttggtgaggataaagaatctaaagtatgt
ccatcatgcaaaacaggtcagcttagcttaaaacttggtaaatttggagcatttttagca
tgtagtaattatcctgaatgtactttcaaaaaatctattgtgagcggtaacgataataac
gaggatgaaggtgatccttcaactattctgaatgataataaaattttaggtactgatcaa
gatggagtagaaatatatcttaaaaaaggaccttacggaccttatattcagcttggcgaa
caatgtggcaaagtaaaaccaaaacgtacccccgtacctgctaacttgaaacaaagtgaa
attacacttgaaattgcattaaagctcctaaacttaccacttaagatcggtatccataag
gatagcggggaagaaattataataggatacagtaaattcggcccttacataaaatatatg
tgtaaatttatttcggtgccaaaaaaatatgattttctcaatttaagcttaaatgatgca
atgaagctaattcaaaacaataaagcgaaattagagaagaaatatggataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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