KEGG   Rhodococcus qingshengii: C1M55_20225
Entry
C1M55_20225       CDS       T05315                                 
Name
(GenBank) long-chain fatty acid--CoA ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
rqi  Rhodococcus qingshengii
Pathway
rqi00061  Fatty acid biosynthesis
rqi00071  Fatty acid degradation
rqi01100  Metabolic pathways
rqi01212  Fatty acid metabolism
rqi02024  Quorum sensing
Module
rqi_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rqi00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    C1M55_20225
   00071 Fatty acid degradation
    C1M55_20225
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C1M55_20225
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rqi01004]
    C1M55_20225
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rqi04147]
    C1M55_20225
Enzymes [BR:rqi01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     C1M55_20225
Lipid biosynthesis proteins [BR:rqi01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   C1M55_20225
Exosome [BR:rqi04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   C1M55_20225
  Exosomal proteins of breast cancer cells
   C1M55_20225
SSDB
Motif
Pfam: AMP-binding
Other DBs
NCBI-ProteinID: AUS33185
UniProt: A0AA34W248
Position
1:4380125..4381912
AA seq 595 aa
MREFSVPQSFSIPENVSMADSVFRHAEEDPTFVPFKRPSNGGWVDVTAAEFAKQVSSVAK
GLIASGVELGDRVAILSATRYEWVVLDYAIWTAGGCTVAIYETSSPDQAQWILEDSATTL
LVVETAKHAETHKEVTDGAEALREVLVIESGAIDELSSRGSAITDEELHTRRHQVTAASP
ATLIYTSGTTGRPKGVQLTHSNFYAESNACRLAMPESMVPGKKTLMFLPLAHVFARAISF
GAFDAKVTVAHTSDLTTLLEQFAGFKPNFILSVPRVFEKVYNSARQKAVDGGKGSIFDKA
AATAIEYSESLEKGGPGLALKLKHAVFDKLVYSKLRAALGGECERAVSGGAALGARLGHY
FRGVGIPIYEGYGLTETSAAITVNTSSAQRVGTVGKPINGHAARIAEDGELLLQGPVVFA
GYWHNEKATAESIVDGWFHTGDLGSIDNEGYVSITGRKKEIIVTAGGKNVAPAGLEDSLR
AHALISQCLVVGDGQPFIGALITLDPETLPGWVERNGLPAGTPIADLVKNADLIAEIDSA
VADANKKVSNPEQIKKYTILEVDFTQETGELTPTLKLKRNIIHEAHKTKISDLYA
NT seq 1788 nt   +upstreamnt  +downstreamnt
gtgcgcgagttctcagttccacagtcgttctcaattccggagaacgtatccatggccgac
tccgtgttccgtcacgccgaagaagaccccacattcgtgccgttcaagaggccgtcgaac
ggtggatgggtcgacgtcactgcagctgaattcgcgaagcaggtctcctcagttgccaag
ggcctgatcgcttcgggcgtcgagctcggcgaccgcgtcgctatcctgtcagcgactcgc
tacgagtgggtcgttctcgactacgccatctggactgcaggcggatgcaccgtcgcgatc
tacgagacctcctcccctgatcaggcgcagtggatcctcgaggattcagcgacgacactt
ctggtcgtcgaaacggccaagcacgcggagactcacaaggaagtcaccgacggcgcagaa
gccctccgcgaggttcttgtcatcgagtcgggtgcgatcgacgagctgtccagtcgcggt
tcggcaatcaccgacgaagaactgcacactcgtcgtcaccaggtcaccgctgcctcgccc
gcgaccctgatctacacctccgggaccaccggacgccccaagggtgtccagctgacgcac
tccaacttctacgccgagtccaacgcctgccgcctggcgatgccggagtcgatggtcccc
ggcaagaagactctgatgttcctgccgcttgcccacgtattcgcgcgggcgatctccttc
ggcgctttcgacgccaaggtcacggtcgcccacacgtcggacctgacgacgctgctcgag
cagttcgccggcttcaagcccaacttcatcctctcggtgccccgcgtgttcgagaaggtg
tacaactcggctcgccagaaggcagtcgacggcggtaagggcagcatcttcgacaaggct
gctgccaccgccatcgaatacagcgaatccctcgaaaagggtggccccggcctggcactc
aagctcaagcacgcggtattcgacaagctcgtctactcgaagttgcgcgcagctctgggt
ggcgagtgcgagcgtgcagtctccggtggcgcagccctcggcgcgcgtctcggccactac
ttccgcggcgtcggcatcccgatctacgagggctacggactcacggagaccagcgccgca
atcaccgtcaacacctcgagtgcgcagcgcgtcggcaccgtcggcaagccgatcaacggc
catgcagcacggatcgccgaggacggcgaactcctcctgcagggcccggtcgtgttcgcc
ggctactggcacaacgagaaggccactgccgaatccatcgtcgacggctggttccacacc
ggcgacctcggctcgatcgacaacgagggctacgtctccatcaccggacgcaagaaggaa
atcatcgtcaccgcgggcggcaagaacgtcgcaccggcaggcctcgaagattccctgcgc
gcgcacgctctgatcagccagtgcctcgtcgtcggcgacggtcagccgttcatcggtgca
ctgatcaccctcgatccggagactctgcccggttgggtcgagcgcaacggcctgcccgcc
ggcaccccgattgccgatctggtgaagaacgccgacctgatcgccgagatcgactcggcc
gttgccgacgcgaacaagaaggtctccaaccccgagcagatcaagaagtacacgatcctc
gaggtcgacttcacccaggagaccggtgaattgacgccgacgctcaagctcaagcgcaac
atcattcacgaagctcacaagaccaagatcagcgacctgtacgcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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