KEGG   Rubrobacter radiotolerans: RradSPS_1055
Entry
RradSPS_1055      CDS       T03080                                 
Name
(GenBank) polc: DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
rrd  Rubrobacter radiotolerans
Pathway
rrd03030  DNA replication
rrd03430  Mismatch repair
rrd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rrd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RradSPS_1055
   03430 Mismatch repair
    RradSPS_1055
   03440 Homologous recombination
    RradSPS_1055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rrd03032]
    RradSPS_1055
   03400 DNA repair and recombination proteins [BR:rrd03400]
    RradSPS_1055
Enzymes [BR:rrd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RradSPS_1055
DNA replication proteins [BR:rrd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RradSPS_1055
DNA repair and recombination proteins [BR:rrd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RradSPS_1055
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HHH_3
Other DBs
NCBI-ProteinID: AHY46338
UniProt: A0A023X1W7
Position
1114650..1118165
AA seq 1171 aa
MSSGGDFAHLHCHSEYSMLDGASRIKDLVAFAKGEGSPGIALTDHGCMYGMVKFYQEAMG
AGIKPLMGCEVYVTADRHDRSRSSYYHLTLIARTGEGYRNLLKLSTAGYLEGFYYKPRVD
MELLRRYGKGIICLSGCLSAEVPSKILEGKLDEARQRLLDYEEIFDAVYLEMQDHGIDLQ
RRVNEGIIKLHKETGIDLVATNDSHYTARSDAKMHDVLLCIGTGKFYNDPKRMRFDGEEF
YVKSKEEMARIFPDHPEALENTIKVVNSVEDVGLELGKTRLPNFEKPAGHTAKSYLRELC
ERGLVNRYGERARSPEVRQRLDFELETIGKMGFEDYFLIVWDFVRYAKEQKIAVGPGRGS
AAGSIVAYALEITDLDPLEYSLLFERFLNPDRISMPDVDIDFSVGGRAEVMRYVTEKYGG
HEHVAQIITFGTIGAKAAIRDAGRIYQFPYGETDKLAKFIPEKPVGTGLRDVLIQRDDGE
YEPGEKHPGAAREMISYVKANDSARQVLDTAFEIEGYARHAGTHAAGVVISEEKLTDIVP
LQRVAKDEGAVMVQHPMSDVEALGLLKVDFLGLRNLDVIEETLATIKETRGEEVDIAKVP
LDDEETLKLFERGDTFGVFQFESSGMQRMLQEVRPDRFDDLVALNALYRPGPMDYIPTFK
KGKHDPESVVYLDERLKPILEPTYGVAAYQEQLMEISKSIGGFTPGEADTLRKAIGKKNL
KLLAPLKDKFVSGCEKNGVGEEVAEELWGWMEKAGGYSFNKSHSACYSFLAFQTGYLKAH
YPTEYMAALLSSVMNTKDRVPQYVAEARAMKIEVLPPDVNESGHRFTAVDGKILFGLSAV
KGVGEGCVEAIIEAREAGGPFADIFDFCDRVPPKTVSKRVLESLIKCGAFDSMGVGRQAL
LAVHAQAADRAAAAAKGADEGQFAMFDVTELAPPKPEIPEMEDDKRETLEWEKETLGLFV
SDHPLRPVLHKLKKHVDTSVSELDGRRDGDFVWVGGLATSVRVNTTRKGDTMAMMQLDDT
RGLAEVMVFPRVYAKFSGAIREDAIVKVKGRVERKEGLPRIMAMEVEELDLKPGADPLYL
RASAFTGLARKEARRAFEVIQRFPGDAPLMLVTDDGRVEERIADVEDAGDLHAELKRILG
LDSIGYARPAPEAGEEREPLPPEPVRMERVS
NT seq 3516 nt   +upstreamnt  +downstreamnt
ttgtcgagcgggggggatttcgcgcacctgcactgccattcggagtactcgatgctggac
ggggcgagccggataaaggaccttgtcgcgttcgcgaagggagagggttccccgggcatc
gcgctgaccgatcacggctgcatgtacggtatggtgaagttctaccaggaggcgatgggg
gccgggatcaagccgctaatgggctgcgaggtctatgtgaccgccgaccgtcacgaccgg
agccggagcagctactatcacctgacgcttatcgcccgcaccggcgaaggctacagaaac
ctcctgaagctctcgaccgccggttaccttgaaggcttctactacaagccccgcgtggac
atggagcttcttcggcggtacgggaagggcatcatctgcctctccgggtgtctctctgcc
gaagtgccgtcgaagatcctcgaagggaagctagatgaggcgcggcagaggctccttgat
tacgaggagatcttcgacgccgtctaccttgagatgcaggaccacgggatagacctgcag
cggcgcgtgaacgagggcatcatcaagctccacaaggagaccgggatagacctcgtcgca
acgaacgactcgcactacaccgcccgctcggacgcgaagatgcacgacgtccttctgtgc
atcgggactgggaagttctacaacgaccccaagcgcatgaggttcgacggcgaggagttc
tacgtcaagagcaaagaggagatggcgcgcatcttccccgatcaccccgaggcgcttgag
aacacgataaaggtcgtgaacagcgtcgaggacgtggggcttgagctcggcaaaacgcgc
ctgccgaacttcgagaagcccgccggacacacggcgaagtcgtacctgagagagctatgt
gagcgtggcctcgtgaaccgctacggcgagcgcgcgaggtcgccggaggtcaggcagcgg
ctcgacttcgagctggagaccataggcaagatgggctttgaggactacttccttatcgtg
tgggactttgtccggtacgcaaaggagcagaagatagccgtaggccccgggcgaggctcc
gctgcgggctcgatcgtcgcctacgcccttgagataacggacctcgacccgcttgagtac
agcctgctcttcgagcggttcctcaacccggaccgcataagcatgccggacgtggacatc
gacttctcggtgggcggtcgcgccgaggtgatgcgttacgtcaccgagaagtacggcggc
cacgagcacgtcgcccagatcatcaccttcgggaccatcggcgcaaaggccgccatccgg
gacgccgggcgcatctatcagttcccctacggcgagaccgacaagctcgccaagttcatc
cccgagaagcccgtcggcacgggcttgcgcgatgtgttgatacaacgagacgatggagag
tacgagccgggagagaagcaccccggagcggcgcgggagatgatctcctacgtcaaggcg
aacgactcggcgcggcaggtgctcgatacggccttcgagatcgagggctacgcaaggcac
gccgggacgcatgcggcgggggtcgtgatctcggaggagaagcttacggacatcgtgccg
cttcagagggtggcgaaggacgagggcgcggtgatggtccagcacccgatgagcgacgtg
gaggctctcgggctgctgaaggtggactttctggggctccggaacctcgacgtcatcgag
gagacgctcgccacgataaaggagacccggggcgaggaggtggacatcgcgaaggtcccc
ctcgatgatgaggagaccttgaagctcttcgagcgaggggacactttcggggtctttcag
ttcgagtcgagcgggatgcagcggatgcttcaggaggtccggcccgaccgcttcgacgac
ctcgttgcgctgaacgcgctctaccgtccgggaccgatggactacatcccgacgttcaag
aagggcaagcacgacccggagagcgtcgtttatctggacgagcggctcaagccgatactg
gagccgacgtacggggttgcggcctatcaggagcagctcatggagataagcaagtccatc
ggcggcttcacaccgggcgaggcggatacgctccggaaggccatcggaaaaaagaacctg
aagctcctcgctccgctcaaggacaagttcgtctccggctgcgaaaagaacggcgtcggc
gaggaggtcgccgaggaactctggggctggatggagaaggccggaggctactcgttcaac
aagagccactcggcgtgctactcgttccttgcgttccagaccgggtatctgaaggcccac
tacccgacggagtacatggccgcgctgctttcgagcgtgatgaacacgaaggaccgggtg
ccgcagtacgttgcggaggcgcgggcgatgaagatcgaggtactgccgccggacgtgaac
gagagcgggcacaggttcacggcggtggacgggaagatcctcttcggcctctcggctgtg
aagggcgtcggggagggctgcgtcgaggcgataatcgaggcgcgagaagcgggcgggccg
ttcgccgacatcttcgacttctgcgaccgcgtcccgccgaagacggtctccaagcgcgtt
ctggaatcgcttataaagtgcggggcctttgactctatgggcgtcgggcggcaggccctc
ctcgcggtgcacgcgcaggccgcagaccgcgccgcagccgccgcgaagggcgcggacgag
gggcagttcgcgatgttcgacgtgacggagctcgccccgccgaagccggagatcccggag
atggaggacgacaagcgcgagacgcttgagtgggagaaggagacactcgggctctttgtc
tcggaccaccccttgaggccggttttacacaagctcaagaagcacgtggacacaagcgtt
tcggagctcgacgggcggcgcgacggagacttcgtgtgggtcggggggctcgcgacgagc
gtccgggtgaacacgacgcgcaagggcgacaccatggcgatgatgcagctcgacgacacg
cgcgggcttgcggaggtcatggtctttccgagggtgtacgcaaagttctccggggcgatc
cgggaggacgcgatcgtcaaggtgaagggccgcgtcgagcggaaggagggcctgccgcgc
attatggcgatggaggtcgaggagctcgatctgaagccgggcgcggacccgctctacctc
agggcctcggcgtttacggggcttgcccgcaaggaggcccggcgggcgttcgaggtgata
cagagattccccggcgacgcgccgctcatgctcgtcacggacgacggcagggtagaggag
aggatcgcggacgtcgaggatgcgggggatttgcacgccgagctgaagcgcatcctcggc
ctcgacagcatcggctacgcaaggcccgcaccggaagccggcgaagagcgcgagccgctc
ccgccggagccggtccggatggagcgagtctcctag

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