KEGG T01786: MCC

Rickettsia rhipicephali: MCC_03090

Entry

MCC_03090         CDS       T01786

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

rre Rickettsia rhipicephali

Brite

KEGG Orthology (KO) [BR:rre00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rre03032]
    MCC_03090
   03400 DNA repair and recombination proteins [BR:rre03400]
    MCC_03090
Enzymes [BR:rre01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     MCC_03090
DNA replication proteins [BR:rre03032]
Prokaryotic type
  DNA Topoisomerases
   MCC_03090
DNA repair and recombination proteins [BR:rre03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MCC_03090

SSDB

Motif

Pfam:

Topoisom_bac Toprim Toprim_C_rpt zf-C4_Topoisom Toprim_4

Other DBs

NCBI-ProteinID:

AFC72219

UniProt:

A0AA85YRP9

Position

complement(526320..528650)

AA seq 776 aa
MKLVIVESPAKAKTINKYLGNEFKVIASFGHIRDLPSKKGSVLPDENFAMKYDISDKAGK
YVDAIVKDAKKADAVYLATDPDREGESISWHVAEVIKEKNQVKSDDFFKRVAFNEITKKA
IIHAVENPRKLDTNLVNAQQARRALDYLVGFTLSPLLWRKLPGCKSAGRVQSVALRLICE
REDEIERFKSEEYWDISLKMQNSNNELFTAKLTHINDQKLEKFSIINEKKAKDLTEKLKS
QKFHVDKIEKKQQKRQPQPPFITSSLQQDAARKLGFSAKKTMQIAQKLYEGVDIGKETIG
LITYMRTDGVTLSNDAIADIRKLIDKSYGDKYLPTSPRIYKSKVKNAQEAHEAIRPTNIT
YTPDSLKEKLEKDYYKLYELIWKRTIACQMENVIMNLVVANLASENKEYLAKANGSTIAF
DGFYKVYRESVEDEAEEENKILPPLKEQEPLKTKEVIPNQHFTEPPPRYSEASLVKKLEE
LGIGRPSTYASILSVLQDRKYVALEKKRFIPEELGRLVTVFLVGFFKKYVEYDFTAGLEN
ELDEIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKALDYHLFGENKESKVC
TSCNTGELSLKLGKFGAFLACSNYPECTFRKSIVSGNDNNENEGEPAAMPNENKVLGTDK
NGVEIYLKKGPYGPYIQLGEQGGKVKPKRSPVPASLNQNDITLDIALKLLSLPLKIGIHK
DSDEEIMIGYGKFGPYIKYMGKFISVQKKYDFLNLSLDDAMKLIEENKAKLEKKQA

NT seq 2331 nt +upstreamnt +downstreamnt
atgaaattagtaatagtagaatcgccggcaaaggcaaaaacgataaataaatatttaggt
aatgaatttaaggtcattgcatcattcggtcatattagagatttaccttctaaaaaaggc
tcggtgttacctgatgaaaattttgcaatgaaatatgatatttccgataaagccggtaaa
tatgtagatgccatagttaaagatgctaaaaaagctgatgcagtatatcttgcaaccgat
cctgatcgtgagggtgaatctatctcatggcatgttgcagaggtaataaaagaaaagaat
caagttaaatccgatgattttttcaaaagggtagcatttaacgaaatcactaaaaaagca
attattcatgccgttgaaaaccctaggaaacttgacactaacttagtaaatgcccaacaa
gcaagaagagctttagactatttagtcggctttaccctttcacctcttttatggcgtaag
ttaccgggatgtaaatcggcaggacgtgtgcagtccgtggctctgcgattaatatgtgag
cgagaagatgaaatagagcgttttaagtcagaagaatattgggatattagccttaaaatg
caaaatagtaataatgaactatttactgctaaattgactcacataaacgatcagaaatta
gaaaaattctcaattattaacgaaaaaaaggccaaagatttaaccgaaaaattaaaatct
caaaaatttcatgttgataagatagaaaaaaaacaacaaaaacgtcaaccacaacctcct
tttattacttcatcactacaacaagacgcagcaagaaaattaggttttagtgctaaaaag
actatgcaaatagcacaaaaactttatgagggtgttgatataggtaaggaaactataggg
cttattacttatatgagaaccgacggcgttacattatcaaatgatgcaatagcagatata
cgtaagttaatcgataaaagttacggcgataaatatttaccgactagccctagaatttat
aaatccaaagtaaaaaatgctcaagaagctcatgaagcaataagacccacaaatattact
tatactcctgatagcttaaaagaaaaactagaaaaggattattataagctttatgagttg
atttggaaaagaactatagcctgccaaatggaaaatgttataatgaatttggtagttgca
aatttagcttcggaaaataaagaatatttggcaaaagcaaacggatcgactatagccttt
gacggattttacaaggtttatcgtgaaagtgtggaagatgaagctgaagaagaaaataaa
atactgccgcctttaaaagaacaagagccacttaaaactaaagaagttattccaaatcaa
cattttaccgaaccgcctccaagatattcagaagcaagtttagtaaaaaaacttgaagag
cttgggatcggtcgtccttcgacctatgctagtattttatcggttttacaagatcgaaaa
tatgttgctcttgagaaaaaacgatttatacctgaagagcttggacgtttggtaacggta
tttttagtcggtttcttcaaaaaatacgttgaatatgattttactgcaggacttgaaaac
gaattagacgaaatagcagctggcaaacttgaatggaaagctgctttaaataatttttgg
agcggttttaaccataatattgaatcagtaaacgagcagaaaataaccgagattattagc
tatgtacagaaagcccttgattatcacttgttcggtgagaataaagaatctaaagtttgt
acttcatgtaacacgggcgagcttagcttaaaacttggtaaattcggagcgtttttagca
tgtagtaattaccctgaatgtacttttagaaaatctattgttagcggtaacgataataac
gagaatgaaggcgagcctgccgctatgcctaatgagaataaagttttaggtacggataaa
aacggagtagaaatatatctgaaaaaaggaccttacggaccttatattcaacttggcgaa
caaggaggcaaagtaaagccgaaacgtagccccgtgcctgctagcttgaaccaaaatgat
attacacttgatatagcattaaagcttctaagcttaccgctaaaaataggtattcataaa
gatagcgacgaggaaattatgataggatacggtaaattcggtccttacataaaatatatg
ggtaaatttatttcagtgcaaaaaaaatatgattttctaaatttaagcttagatgatgcg
atgaagctaattgaagagaataaagcgaaattagagaagaaacaggcgtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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