KEGG   Rickettsia rhipicephali: MCC_06070
Entry
MCC_06070         CDS       T01786                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
rre  Rickettsia rhipicephali
Pathway
rre03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MCC_06070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rre03021]
    MCC_06070
   03400 DNA repair and recombination proteins [BR:rre03400]
    MCC_06070
Enzymes [BR:rre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MCC_06070
Transcription machinery [BR:rre03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MCC_06070
DNA repair and recombination proteins [BR:rre03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MCC_06070
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L IDH Par3_HAL_N_term
Other DBs
NCBI-ProteinID: AFC72714
UniProt: A0AA85YS93
Position
complement(1022533..1023555)
AA seq 340 aa
MLSLSKNWNTLIKPNKVAYENFPETNNKAKIVVEPLERGFGLTLGNAMRRVLLSSLQGAA
ITSIKIPAIEHEFSSIPGVKEDVSEVILNIKGIEIKMHVAEKRIMKLKVTGPCVVTAGMI
ETGHDVEILNPDHVICDLAKDKQLEMALTCKVGKGYVLSTNSYEDNLPIGEIAIDALFNP
VKSVTYKVENTRVGQVTDYDKLIMFVETNGDLLPEMAVGLAARILQEQLQLFISFEEQEE
DKQVKTDALPFSPYLLKRVDELELSVRSANCLKNDNIIYIGDLVKRTESDMLRTPNFGRK
SLNEIKEILAKFNLRFGMDVPDWPPENIQELSKRYEDSYN
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgttatcgttaagtaaaaattggaatactttaataaagccgaataaagtcgcttatgaa
aattttccagaaaccaataataaagctaaaattgtagttgaacctttagaaagaggtttt
ggtttaacactcggtaatgctatgagaagagtattactttcttctttacaaggagcagct
atcacttctataaagatccctgctatagaacatgaattttcttctatacccggtgtaaaa
gaagatgtatcggaagtgattttaaacattaaaggtattgaaataaaaatgcatgttgca
gaaaaacgtatcatgaaattaaaggtaacaggaccttgtgttgtaacggccggtatgatt
gaaacaggtcatgatgtagaaatactgaatccggatcatgtaatttgtgatctagctaag
gacaagcagcttgaaatggcattaacttgcaaggttggtaaaggatatgtacttagcaca
aatagttatgaggataatttacctattggtgaaatagctatagatgctttatttaatccg
gtaaagagcgttacttataaggtagaaaatactagggtaggtcaggttaccgattatgat
aaattaattatgtttgtagaaactaacggtgatttattacctgaaatggctgtaggttta
gctgcacgtattttacaggagcaattacaattatttatttcttttgaagaacaggaagaa
gataagcaagttaaaactgatgctttaccattttcaccttatttacttaagagagtcgat
gaattggaattatcggttagatcggcaaattgtttgaaaaatgataatataatatatata
ggggatctagtaaaaagaacggaatccgatatgctgagaactccaaatttcggtagaaaa
tctttaaatgagattaaagaaatattggcaaaatttaatttaagattcggtatggatgta
ccggattggccaccggaaaatattcaggaattatctaaacgttatgaagattcttataat
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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