KEGG   Rhodospirillum rubrum F11: F11_09560
Entry
F11_09560         CDS       T02006                                 
Name
(GenBank) uracil-DNA glycosylase superfamily protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
rrf  Rhodospirillum rubrum F11
Pathway
rrf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rrf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    F11_09560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rrf03400]
    F11_09560
Enzymes [BR:rrf01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     F11_09560
DNA repair and recombination proteins [BR:rrf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     F11_09560
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AEO48378
Position
2158112..2158756
AA seq 214 aa
MTACNPQAPGVDCPRCPRLVAYRLALRRDFPDWANAPVPSFGPLGARLLVVGLAPGVRGA
NRTGRPFTGDYAGDLLYATLIDLGLMTGVFDRRADDGLTPIDVRITNAVRCVPPENKPTG
PEQVACRPFLAAEIAAMPALRGILALGRVAHEAILRTLGQPLKAHPFAHGALHPMPGGLL
LGESYHCSRYNQNTGRLTNPMFREAVTRLVEAIS
NT seq 645 nt   +upstreamnt  +downstreamnt
atgacagcgtgtaatccccaggcgccgggggtcgattgcccccggtgcccgcgactggtc
gcctatcggctggccctgcgccgcgattttcccgactgggcgaatgccccggtcccctcc
ttcggtccgctgggcgcccgcctgctggtggtcggcttggcgcccggcgtgcgcggcgcc
aatcgcaccggccggcccttcaccggcgattacgccggcgacctgctctatgccaccttg
atcgatcttggtttgatgaccggggttttcgaccgccgggccgatgacggcctgacgccg
atcgacgtgcgcatcaccaacgccgtgcgctgcgtgccgcctgaaaacaagccgaccggc
ccagaacaggtcgcctgccggccgttcctggcggcggaaatcgccgcgatgccggcccta
cgcggcatcctggctttgggccgcgtcgcccacgaggcgatcttgcgcacgctcggccaa
cccctgaaggcccaccccttcgcccatggcgccctgcacccgatgccgggcggcctgctg
ctgggcgaaagctatcactgctcgcgctacaaccagaacaccggccgcctgaccaacccg
atgttccgcgaggcggtcacgcgcttggtcgaggcgattagctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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